Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0367 ATGGCAAGGCAGAAGAAGAACAAGATGCAGCTGAAACCTCAGTTTTTCTTCTACTTCTGCTACATTTGCTGTTTCTCTTATGGTTTTGTTGCTGCTGCAGATGATGAAGCATCTGCATTACTCTCTATAAAAGAAGGTCTTATTGATCCATTGAATAGTCTACATAATTGGAAATTGTTGGACAAAGCAGAATGGAAGGATACAGTTCAGTGTAACTGGACTGGTGTGCAATGCAACTCAGTTGGAAGTGTTGAGAAGCTTGATCTCTCTCACATGAATCTGAGTGGAATTGTGTCCAATGAGATACAAAGGCTTAAAAGTCTCACTTCTCTCAACTTGTGTTGTAATGGTTTTTCCTCATCATTGTCAAAGTCCATAGCCAATATGACCACATTGGAGAATCTTGATGTAAGCCAGAATTTCTTCATTGGTGACTTTCCATTAGGCTTTGGAAAGGCATCGAGGCTTATGACCCTGAATGCATCCAGCAACAATTTCTCTGGCTTTCTTCCTGAGGATCTTGGAAATGCCTCTTCCTTAGAGACATTGGATCTTAGAGGCAGTTTCTTTGAAGGGTCAGTTCCAAAATCCTTTAGTAACTTGCACAAGTTGAAGTTCCTTGGTTTATCAGGAAATAATCTCACTGGGGAAATCCCGGGAGAGATAGGAAAACTTTCATCACTGGAGTGCATGATCATTGGGTACAACGAATTTGAAGGTGGGATTCCAGTAGAGTTTGGAAATCTCACCAAGCTAAAGTATCTTGATTTAGCAGAAGGCAATCTTGGTGGTGAAATTCCAGCTGAGTTGGGAAAGCTCAAATTGTTGAGCACAGTTTTCTTATACAAGAACAATTTTGAAGGCAAGATTCCACCGGCAATTGGCAACATGACTTCATTGGTGCAACTTGATCTCTCAGACAACATGTTATCAGGAAATATTCCAGCTGAAATAAGTCAGCTGAAGAATTTACAGCTCCTGAACTTCATGCGTAACCAGTTATCAGGTCCTGTGCCTTTTGGACTTGGAGATTTGCCTCAACTAGAGGTGCTTGAGCTATGGAACAATTCTTTGTCAGGGCCATTGCCTAGTAACCTTGGCAAGAATTCACCATTGCAGTGGTTGGATGTATCATCCAATTCACTCTCTGGTGAGATTCCAGAAACTCTTTGCACCAAGGGCTATCTCACCAAGCTTATACTTTTCAACAATGCTTTCTTGGGTCCAATTCCAGCAAGCCTATCAACATGTCTTTCACTTGTTCGCGTTCGAATTCATAACAATTTTCTTTCTGGGACAATTCCTGTGGGTCTTGGTAAACTTGGGAAGCTTCAGAGGTTAGAATTAGCTAACAATAGTCTCACAGGTGGAATTCCTGATGACATTGGTACTTCTACATCCCTTTCTTTCATTGATTTTTCCAGAAACAACCTTCACTCGTCTCTTCCTTCCACCATTATTTCCATTCCAAATCTGCAAACTTTCATTGTATCCAACAACAAGTTGGGAGGTGAAATCCCTGATCAATTTCAGGATTGTCCCTCACTTGGTGTCCTTGATCTCTCATCAAACTGTTTCTCTGGAAGCATTCCAGCAAGCATTGCTTCATGTCAGAAATTGGTAAACTTGAACCTACAAAACAACCAATTGACTGGTGAAATCTCAAAAGCATTAGCAAGCATGCCTACATTGGCCATTCTTGATCTTTCTAACAACTCTCTGACTGGTCAAATACCTGAAAGCTTTGGTATGTCTCCAGCTCTGGAAACATTCAATGTCTCACACAACAAGCTAGAAGGTCCTGTTCCAGAAAATGGCATGCTACGAACAATAAACCCAAATGATCTTGAGGCCAATGCTGACTTATGTGGTGGTGTCCTCCCCCCATGTGGCCAAACCTCAGCATATTTATTTAGCCAAAGGAGCTCACATGCAAAGCACATTATTGTAGGATGGATCATTGGAATATCATCAATATTGGTCATTGGATTTGCAACTTTTGTAGCAAGATCTTTATACCTAAGGTGGTACACTGATGGATTGTGCTTTCGAGAAAGATTTTATAAGGGTAGCAAAGGGTGGCCTTGGAGATTGATGGCATTTCAGAGGCTTGATTTTACAAGTAGTGACATTTTATCTTGCATCAAGGAAACAAACGTGATTGGCATGGGAGCTACTGGGGTTGTTTACAAGGCCGAGATACCACAATCAAGTACAGTTGTGGCAGTAAAAAAATTGTGGAGATCAGGATCTGATATTGAAGTAGGAAGCAGTGATGACCTTGTTGGAGAGGTGAATCTTTTAGGGAGGCTAAGGCATAGGAACATTGTCAGACTACTAGGCTTTCTTTATAATGACACTGATGTGATGATAGTTTATGAATTTATGCACAATGGAAACCTTGGAGATGCACTGCATGGTAAACAAGCAGGAAGATTACTTGTAGATTGGGTTTCCCGGTATAACATAGCTCTGGGAATTGCTCAAGGACTTGCTTATCTTCATCATGACTGTCATCCACCCATTATCCATCGAGACATTAAGTCAAATAATATACTTCTTGATGCAAATCTTGACGCAAGGATAGCAGATTTTGGGTTAGCCAAGATGATGATCAGGAAGAACGAAACAGTGTCCATGATTGCTGGATCCTATGGATATATTGCCCCTGAATATGGATACTCCTTGAAAGTGGATGAAAAGATTGACATTTACAGTTATGGAGTAGTTCTGTTGGAGCTTCTCACAGGAAAGAGGCCTTTAGAACCAGAATTTGGAGAATCTATAGACATTGTAGGGTGGATTAGAAGGAAGATAGACAACAAATCTCCAGAAGCAGCATTAGATCCTAGTGTAGGAAACTGTAAGCATGTTCAAGAAGAGATGCTTTTAGTTCTCAGAATAGCACTTCTTTGCACTGCCAAGCTCCCCAAGGACAGACCCTCCATGAGGGACGTTATAATGATGCTTGGAGAGGCAAAGCCTAGGAGAAAGAGTGGTAGGAGCAATGAAACATTTGCAGCTAACAAGGAGATGCCGGTTATGAACACATCACCAGTTAATGGCCTTTTGTAG 3075 0.4107 MARQKKNKMQLKPQFFFYFCYICCFSYGFVAAADDEASALLSIKEGLIDPLNSLHNWKLLDKAEWKDTVQCNWTGVQCNSVGSVEKLDLSHMNLSGIVSNEIQRLKSLTSLNLCCNGFSSSLSKSIANMTTLENLDVSQNFFIGDFPLGFGKASRLMTLNASSNNFSGFLPEDLGNASSLETLDLRGSFFEGSVPKSFSNLHKLKFLGLSGNNLTGEIPGEIGKLSSLECMIIGYNEFEGGIPVEFGNLTKLKYLDLAEGNLGGEIPAELGKLKLLSTVFLYKNNFEGKIPPAIGNMTSLVQLDLSDNMLSGNIPAEISQLKNLQLLNFMRNQLSGPVPFGLGDLPQLEVLELWNNSLSGPLPSNLGKNSPLQWLDVSSNSLSGEIPETLCTKGYLTKLILFNNAFLGPIPASLSTCLSLVRVRIHNNFLSGTIPVGLGKLGKLQRLELANNSLTGGIPDDIGTSTSLSFIDFSRNNLHSSLPSTIISIPNLQTFIVSNNKLGGEIPDQFQDCPSLGVLDLSSNCFSGSIPASIASCQKLVNLNLQNNQLTGEISKALASMPTLAILDLSNNSLTGQIPESFGMSPALETFNVSHNKLEGPVPENGMLRTINPNDLEANADLCGGVLPPCGQTSAYLFSQRSSHAKHIIVGWIIGISSILVIGFATFVARSLYLRWYTDGLCFRERFYKGSKGWPWRLMAFQRLDFTSSDILSCIKETNVIGMGATGVVYKAEIPQSSTVVAVKKLWRSGSDIEVGSSDDLVGEVNLLGRLRHRNIVRLLGFLYNDTDVMIVYEFMHNGNLGDALHGKQAGRLLVDWVSRYNIALGIAQGLAYLHHDCHPPIIHRDIKSNNILLDANLDARIADFGLAKMMIRKNETVSMIAGSYGYIAPEYGYSLKVDEKIDIYSYGVVLLELLTGKRPLEPEFGESIDIVGWIRRKIDNKSPEAALDPSVGNCKHVQEEMLLVLRIALLCTAKLPKDRPSMRDVIMMLGEAKPRRKSGRSNETFAANKEMPVMNTSPVNGLL* 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0367 1024 Gene3D Ribonuclease Inhibitor 32 187 IPR032675 -
Apr8g0367 1024 Gene3D Ribonuclease Inhibitor 188 284 IPR032675 -
Apr8g0367 1024 SUPERFAMILY L domain-like 339 604 - -
Apr8g0367 1024 Pfam Protein kinase domain 717 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0367 1024 SUPERFAMILY RNI-like 86 431 - -
Apr8g0367 1024 Gene3D Transferase(Phosphotransferase) domain 1 800 1014 - -
Apr8g0367 1024 Pfam Leucine rich repeat 490 550 IPR001611 GO:0005515
Apr8g0367 1024 Pfam Leucine Rich Repeat 179 201 IPR001611 GO:0005515
Apr8g0367 1024 Pfam Leucine Rich Repeat 565 582 IPR001611 GO:0005515
Apr8g0367 1024 Gene3D Ribonuclease Inhibitor 285 392 IPR032675 -
Apr8g0367 1024 ProSiteProfiles Protein kinase domain profile. 715 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0367 1024 SMART LRR_typ_2 297 321 IPR003591 -
Apr8g0367 1024 SMART LRR_typ_2 489 512 IPR003591 -
Apr8g0367 1024 SMART LRR_typ_2 201 225 IPR003591 -
Apr8g0367 1024 SMART LRR_typ_2 561 584 IPR003591 -
Apr8g0367 1024 SMART LRR_typ_2 249 273 IPR003591 -
Apr8g0367 1024 SMART LRR_typ_2 345 369 IPR003591 -
Apr8g0367 1024 SMART LRR_typ_2 105 128 IPR003591 -
Apr8g0367 1024 SMART LRR_typ_2 441 465 IPR003591 -
Apr8g0367 1024 ProSitePatterns Protein kinases ATP-binding region signature. 721 745 IPR017441 GO:0005524
Apr8g0367 1024 SMART serkin_6 715 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0367 1024 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 10 1006 - -
Apr8g0367 1024 Gene3D Ribonuclease Inhibitor 393 634 IPR032675 -
Apr8g0367 1024 Gene3D Phosphorylase Kinase; domain 1 715 799 - -
Apr8g0367 1024 Pfam Leucine rich repeat N-terminal domain 33 79 IPR013210 -
Apr8g0367 1024 SUPERFAMILY Protein kinase-like (PK-like) 708 990 IPR011009 -
Apr8g0367 1024 PANTHER UNNAMED PRODUCT 10 1006 - -
Apr8g0367 1024 ProSitePatterns Serine/Threonine protein kinases active-site signature. 842 854 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0367 Apr-Chr8 3090311 3094429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0367 13 1024 Receptor kinase-like Gene Family AT1G08590 60.174 0.0 1166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr8g0367 Pkinase 2.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0367 - - gmx:100788430 1801.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0367 8 3090311 3094429 Apr8g0367 8 3090311 3094429 ECH