Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0359 ATGAGCAATGAACAAGAAGATGACTACCTTTTGGCTGAGGCAAGGCAACCATTGTGGCGCAAAGTTCCAATAGCTTCAAGCCTGATCAACCCATATCGCATAGTGATAGTGATGCGTTTGGTTATCCTAGTTTTCTTCTTTCACTTGAGGATCACAACACCAGTGCATGATGCATTGGTCTTGTGGATAATCTCTGTAGTGTGTGAAATTTGGCTTGCTTTGTCTTGGATAGTTGACCAACTCCCCAAGTGGTTCCCTATTACTCGTGAAACTTACTTGGACCGTTTGTCTATAAGGTTTGAGCATGAAGGGGAACCAAACCTTTTAGCCTCAGTTGATGTTTTTGTGACCACTGCAGACCCTTTGAAGGAACCACCTATTATAACAGCAAACACGGTTCTATCAGTGTTGTCTGTTGATTATCCTGTTGAGAAGGTTAGTTGCTATGTCTCTGATGACAGTGCATCTATGCTTCTCTTTGATACCTTGTCAGAAACTGCTGAGTTTGCAAGAATATGGGTTCCTTTTTGTAACAAGTATAATATTGAGCCAAGGGCACCCGAGTTTTATTTCTCTCAGAAAGTTGATTACTTGAAAGATAAGGTGCACCCCACATTTGTTAAGGATCGCAGGGCCATGAAGAGAGAGTATGAAGAATTCAAGGTGAAAATCAATGTGTTGGTTGCAAAGGCTCAGAAAAAACCAGAAGAAGGGTGGATGATACAAGATGGTACTCCATGGCCAGGGAACAACACTGATGATCACCCAGGAATGATTCAGGTGTGTCTGGGAAGTGCTGGTACACTGGACAATGAAGGCAAGGAACTGCCAAGACTTGTGTATGTTTCGCGGGAAAAACGTCCTGGCTATCAACACCACATGAAAGCTGGCGCCATGAACGCTGTGGTTCGAGTTTCAGCTGTGCTTAGTAATGCACCTTTTGTGTTGAATCTGGATTGTGATCAATACATAAATAATAGCAAGGCTCTCAGGGAGGCTATGTGCTTTTTAATGGACCCTCAACTTGGAAAGAAGTTATGTTATGTCCAATTTCCGCGAAGGTTTGATGGCATTGATTGCAATGACAGATATGCTAATCACAATACTGTATTCTTTGATATCAACATGAAATGCCTTGATGGAATTCAAGGTCCAGTGTATGTTGGCACTGGATGTGTGTTCAACAGGCAGGCTTTATATGGCTATGAGCCACTATCTGAGAAAAAGCCAACGATGAGGAGTTGCTGCTGTTGTTCTGATGATTCTCAGTCCATTTTTGAGGGTGAAGAGACTGATGAAGAGCTTGAAGACTTCTTTGATGAGCAAGAGGAACCACCCTTCATGTCCCCAAAAAATTTAGAAAAACGATTTGGACAATCACCAGTTTTCATTACTTCTGCTATGATGGAAGATGGTGGACTTCCAAAAGGCACCAATTCACAATTACTGATCAAGGAAGCCATTCATGTCATAAGCTGTGGCTATGAAGAGAAAACTGAATGGGGCAAAGAGATTGGGTGGCTTTATGGCTCAGTCACAGAAGACATCTTAACTGGGTTTAACATGCATTGTAGAGGATGGAAATCAGTGTACTGCATGCCAAAGAGAGCAGCTTTTAAAGGATCTGCTCCTATAAATCTATCAGACAGATTACACCAAGTTTTGAAATGGGCTTTGGGTTCCACTGAGATTTTCTTTAGTGGCTATTGCCCTTTGTGGTATGGCTATAGAGGAAAACTGAAATGGCTACAGAGGCTGGCTTACACTAATGCCATCGTTTATCCATTCACTTCCATCCCTCTGCTAATATACTGTACAGTGCCAGCTATCTGTCTTCTGACTGGGAAGTTCATCATCCCCACTCTGACAAACCTTGCTAGCATTTGGTTAATGGCTCTATTTATCTTCACCATCTTAACATGTGTGCTAGAGATTCGTTGGAGTGGGGTTAGCATTCAGGACTGGTGGCGCAATGAGCAATTCTGGGTCATTGGGGGTGTTTCTGCACACTTTTTTGCTGTATTTCATGGTCTCCTTAAAGTTGCTGGAGTGGACACCAACTTCACTGTGAGAGCAAAATCAGCAGAAGAAACTGCATTTGGACAGCTCTATCTCTTCAAGTGGACAGCTCTTCTCATCCCACCAACAAGTCTTGTGATTTTGAATATGGTGGGAATTGTGGCTGGAATCTCTGACGCCATTAACAATGGCTATGACTCATGGGGCCCTTTATTTGGGAAGCTTTTCTTTTCCTTCTGGGTCATTGTGCACTTATATCCTTTCCTCAAAGGTCTAATGGGAAGGAAAAATAGAACCCCTACCATAGTAGTGCTCTGGTCAATATTTCTAGCATTAATTTTCTCTATGATTTGGGTGAGAATTGATGTTTTCTTGCCCAAGAAGACAGGTCCAGTACTCAAACAATGTGGGATCAGATGCTAA 2442 0.4247 MSNEQEDDYLLAEARQPLWRKVPIASSLINPYRIVIVMRLVILVFFFHLRITTPVHDALVLWIISVVCEIWLALSWIVDQLPKWFPITRETYLDRLSIRFEHEGEPNLLASVDVFVTTADPLKEPPIITANTVLSVLSVDYPVEKVSCYVSDDSASMLLFDTLSETAEFARIWVPFCNKYNIEPRAPEFYFSQKVDYLKDKVHPTFVKDRRAMKREYEEFKVKINVLVAKAQKKPEEGWMIQDGTPWPGNNTDDHPGMIQVCLGSAGTLDNEGKELPRLVYVSREKRPGYQHHMKAGAMNAVVRVSAVLSNAPFVLNLDCDQYINNSKALREAMCFLMDPQLGKKLCYVQFPRRFDGIDCNDRYANHNTVFFDINMKCLDGIQGPVYVGTGCVFNRQALYGYEPLSEKKPTMRSCCCCSDDSQSIFEGEETDEELEDFFDEQEEPPFMSPKNLEKRFGQSPVFITSAMMEDGGLPKGTNSQLLIKEAIHVISCGYEEKTEWGKEIGWLYGSVTEDILTGFNMHCRGWKSVYCMPKRAAFKGSAPINLSDRLHQVLKWALGSTEIFFSGYCPLWYGYRGKLKWLQRLAYTNAIVYPFTSIPLLIYCTVPAICLLTGKFIIPTLTNLASIWLMALFIFTILTCVLEIRWSGVSIQDWWRNEQFWVIGGVSAHFFAVFHGLLKVAGVDTNFTVRAKSAEETAFGQLYLFKWTALLIPPTSLVILNMVGIVAGISDAINNGYDSWGPLFGKLFFSFWVIVHLYPFLKGLMGRKNRTPTIVVLWSIFLALIFSMIWVRIDVFLPKKTGPVLKQCGIRC* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0359 813 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 226 408 IPR029044 -
Apr8g0359 813 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 4 813 - -
Apr8g0359 813 Pfam Cellulose synthase 112 806 IPR005150 GO:0016020|GO:0016760|GO:0030244
Apr8g0359 813 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 4 813 - -
Apr8g0359 813 SUPERFAMILY Nucleotide-diphospho-sugar transferases 127 618 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0359 Apr-Chr8 3026670 3030195 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0359 1 813 Cell Wall Biosynthesis AT5G17420 70.874 0.0 1239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0359 K10999 - gmx:100777278 1491.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0359 8 3026670 3030195 Apr8g0359 8 3026670 3030195 ECH