Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0348 ATGATGAAAGTGGGATTTGAGGTGGTTCATGCAAATCCAAACATGATTCATCCTCACATGCATGGAACTTGGGACTACCCAAATATTTCTGCTAATTCCTTGCCATTACCAGCTCCAACCCCATCAAACCTATATCCAAAGCCAGCATCAGAAAATCACTGCCTAAACTTGGGTCAAAATGAGCTTTGTGATTGGGTGGAGGAGCACATTGGTGATATTACCAAACACCTTGTTGAAGACTTACCAGAAACCACACCTAATAACAACAACTACACCAATCTCCACATTCAAACAAACACCTCAGGTTTAGATCCTGACCACAATGTTTATGATCATGAGTTGAACCTAATAACCATTCTAATGGAGTGTGCAGTTGCAATCTCAGTTGAGAACCTTGGTGAGGCTCACAAGATGTTACTTGAACTAACACAAGTAGCCTCACCCTACAAAGCATCATGTGCTGAACGTGTTGTTGCCTATTTTGCAAAGGCCATGGCTAGCAGGGTGATTAACTCTTGGCTTGGTGTGTGTTCCCCTTTGGTTGATCACAAGAGCATTCACTCAGCATTCCAAGTCTTCAACAACGTTTCCCCTTTCATAAAGTTTGCTCATTTCACTTCCAACCAAGCAATCCTTGAGGCTGTGAGCCATTGTGAAAGCATTCACATCATTGACTTAGACATCATGCAAGGCTTGCAATGGCCAGCTTTCTTCCATATATTAGCCACAAGAATGGAGGGTCCCCCTCAGGTCACAATGACAGGTATGGGAACCTCAATGGAACTCCTTGTTGAAACTGGAAAACAACTCTCAAACTTTGCAAGAAGGCTTGGCATGTCATTGAAGTTCCACCCTCTTGCAACCAAGTTTGGAGAAGTTGATGTTTCCATGTTGCAAATAAGGCATGGTGAGACACTAGCAGTGCATTGGTTGCAACATTCTTTGTATGATGCAGCTGGACCTGATTGGAAAACATTGAGGCTTCTCGAGGAGTTGGAGCCAAGAATCATCACTTTGGTAGAGCAAGATGTTATCCATGGAGGGTCTTTCTTGGACCGTTTTGTTGCCTCCTTGCACTACTACTCCACACTTTTTGACTCTCTTGGAGCATATTTGCACTGTGATGATGCTAGTAGACATCGTGTGGAACATGGCCTTCTTTCTAAGGAGATTAACAATATATTAGCCATAGGAGGCCCTGCAAGGAGTGGTGAAGACAAGTTTAGGCAATGGAGAAGTCAGCTTTGTAGGCATTGTTTTGTGCAGGTTCCAATGAGTGTGAATTCAATGGCTCAAGCACAGTTGATATTGAACATGTTTGCACCAGCTCATGGTTATAGCCTTGCACAAATTGATGGCACATTAAGGCTTGGATGGAAGGATACCAGCTTGTACACTGCTTCTGCATGGACCAGTAGAACTTACTAG 1428 0.4342 MMKVGFEVVHANPNMIHPHMHGTWDYPNISANSLPLPAPTPSNLYPKPASENHCLNLGQNELCDWVEEHIGDITKHLVEDLPETTPNNNNYTNLHIQTNTSGLDPDHNVYDHELNLITILMECAVAISVENLGEAHKMLLELTQVASPYKASCAERVVAYFAKAMASRVINSWLGVCSPLVDHKSIHSAFQVFNNVSPFIKFAHFTSNQAILEAVSHCESIHIIDLDIMQGLQWPAFFHILATRMEGPPQVTMTGMGTSMELLVETGKQLSNFARRLGMSLKFHPLATKFGEVDVSMLQIRHGETLAVHWLQHSLYDAAGPDWKTLRLLEELEPRIITLVEQDVIHGGSFLDRFVASLHYYSTLFDSLGAYLHCDDASRHRVEHGLLSKEINNILAIGGPARSGEDKFRQWRSQLCRHCFVQVPMSVNSMAQAQLILNMFAPAHGYSLAQIDGTLRLGWKDTSLYTASAWTSRTY* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0348 475 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 471 IPR005202 -
Apr8g0348 475 Pfam GRAS domain family 117 471 IPR005202 -
Apr8g0348 475 PANTHER OS05G0485400 PROTEIN 15 471 - -
Apr8g0348 475 ProSiteProfiles GRAS family profile. 107 471 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0348 Apr-Chr8 2950789 2952345 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0348 122 474 GRAS Transcription Factor Family AT3G54220 55.000 7.25e-137 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr8g0348 GRAS 1.7e-102 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0348 - - gmx:100775656 793.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0348 8 2950789 2952345 Apr8g0348 8 2950789 2952345 ECH