Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0347 ATGGATTCTGCAAGGAGTTGGCTTCAGAAGTTCCAGCCTCGGGATAAAACGAGGGGTGCTGCAAAGAAGAAAGAGGAGGATAGTAATGGAGGTAATTATGAATCGAATGGACCTGAGGATGAAGCATCGCTTTCAAGTGCCACGAAGCAGAAGGTGGCAGCTGCAAAGCAGTACATTGAAAACCATTATAAGGAGCAAATGAAGAATCTTCAGGAGAGGAAGGAGCGTCGAACCACCTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCTGAAGAAGATCAAAACAACCTGCTTAAATTTTTAGAGAAAAAGGAAACTGAATATATGCGCCTTCAGAGGCATAAGATGGGTGTTGATGATTTTGAGTTATTGACTATGATCGGAAAAGGTGCATTTGGGGAGGTCAGAGTCTGTAGGGAGAAGACGACTGGTCATGTATATGCAATGAAAAAACTAAAGAAATCAGAGATGCTTCGCAGAGGCCAGGTTGAACATGTCAAAGCTGAAAGGAACCTCCTTGCAGAGGTTGACAGCAATTGCATAGTCAAACTTTATTGTTCTTTCCAAGATGAAGAATATCTGTATCTTATTATGGAGTATCTACCTGGTGGGGATATGATGACTCTACTTATGAGAAAGGATATCTTGACTGAAGATGAAACCAGATTTTATGTAGGAGAAACAGTTTTGGCTATTGAATCTATACATAAACACAATTATATACATAGGGATATCAAGCCAGACAACTTATTACTAGATAGATATGGACACTTAAGGCTGTCAGATTTTGGACTTTGTAAACCATTAGATTGTAGTACACTTGAAGAAAAAGACTTTTCTGTGGGTCAGAATGCGAATGGACCTACACAGTCTGATGAGCGTGCAGCTCCAAAACGCTCACAACAGGAACAATTGCAACATTGGCAAAAGAATAGGAGGACACTCGCTTATTCCACAGTTGGTACACCGGATTATATTGCTCCAGAAGTTCTTTTGAAGAAAGGTTATGGGATGGAATGTGATTGGTGGTCACTTGGAGCTATTATGTATGAAATGTTGGTGGGATATCCACCTTTTTATTCTGATGATCCAATGTCAACATGTAGGAAGATAGTAAACTGGAAATCTCACTTGAAATTTCCTGAAGAAGCTAGACTATCCCCTGAGGCTAAAGATCTTATTAGTAAACTTTTGTGTAATGTCAACCAGAGGTTGGGGTCAAAAGGTGCAGATGAAATAAAGGCTCATCCATTCTTCAAAGGTCTTGAATGGGATAAACTTTATCACATGGAAGCTGCATTTATTCCTGAGGTCAATGATGAGTTAGATACTCAGAACTTTGAAAAGTTTGATGAGTCGGACAGCCAAAGTCAATCATCATCTAGAGCTGGTCCATGGAGGAAGATGCTTTCGTCTAAGGACTTGAATTTTGTTGGATATACGTACAAGAACTTTGAAATTGTCAACGATTATCAAGTTCCTGGGATGGCTGAACTTAAGAAGAAACCTTCCAAATCCAAGAGACCATCTATCAAGTCGCTTTTTGATCTTGAATCAGAAACACCAGAGGCATCTGAGGAGGAACCACATACTCCTGTGGGTAATCAACCTGCTCAAGGAAGCTTTTTAAATCTCTTGCCGCCCCAATTAGAGGGGTCTCATAGCCAGAAGAATCATCCTCCTAGGTCCTAA 1692 0.4048 MDSARSWLQKFQPRDKTRGAAKKKEEDSNGGNYESNGPEDEASLSSATKQKVAAAKQYIENHYKEQMKNLQERKERRTTLEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDILTEDETRFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHLRLSDFGLCKPLDCSTLEEKDFSVGQNANGPTQSDERAAPKRSQQEQLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWKSHLKFPEEARLSPEAKDLISKLLCNVNQRLGSKGADEIKAHPFFKGLEWDKLYHMEAAFIPEVNDELDTQNFEKFDESDSQSQSSSRAGPWRKMLSSKDLNFVGYTYKNFEIVNDYQVPGMAELKKKPSKSKRPSIKSLFDLESETPEASEEEPHTPVGNQPAQGSFLNLLPPQLEGSHSQKNHPPRS* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0347 563 CDD STKc_NDR_like 119 483 - -
Apr8g0347 563 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 525 - -
Apr8g0347 563 SMART pkinase_C_6 420 484 IPR000961 GO:0004674|GO:0005524|GO:0006468
Apr8g0347 563 MobiDBLite consensus disorder prediction 1 50 - -
Apr8g0347 563 ProSiteProfiles Protein kinase domain profile. 121 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0347 563 SMART serkin_6 121 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0347 563 Pfam Protein kinase domain 122 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0347 563 MobiDBLite consensus disorder prediction 500 514 - -
Apr8g0347 563 MobiDBLite consensus disorder prediction 532 556 - -
Apr8g0347 563 Pfam Protein kinase C terminal domain 438 482 IPR017892 GO:0004674|GO:0005524|GO:0006468
Apr8g0347 563 Gene3D Phosphorylase Kinase; domain 1 119 204 - -
Apr8g0347 563 Gene3D Phosphorylase Kinase; domain 1 438 448 - -
Apr8g0347 563 MobiDBLite consensus disorder prediction 280 302 - -
Apr8g0347 563 MobiDBLite consensus disorder prediction 31 50 - -
Apr8g0347 563 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
Apr8g0347 563 MobiDBLite consensus disorder prediction 9 30 - -
Apr8g0347 563 MobiDBLite consensus disorder prediction 498 563 - -
Apr8g0347 563 ProSiteProfiles AGC-kinase C-terminal domain profile. 420 492 IPR000961 GO:0004674|GO:0005524|GO:0006468
Apr8g0347 563 Gene3D Transferase(Phosphotransferase) domain 1 314 437 - -
Apr8g0347 563 Gene3D Transferase(Phosphotransferase) domain 1 205 271 - -
Apr8g0347 563 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 525 - -
Apr8g0347 563 SUPERFAMILY Protein kinase-like (PK-like) 94 472 IPR011009 -
Apr8g0347 563 Coils Coil 63 83 - -
Apr8g0347 563 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0347 Apr-Chr8 2938753 2947480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0347 1 515 AGC Kinase Gene Family AT2G20470 79.576 0.0 857
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Apr8g0347 Pkinase 6.4e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0347 K08790 - gmx:100820558 991.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0347 8 2938753 2947480 Apr8g0347 8 2938753 2947480 ECH
Apr8g0347 8 2938753 2947480 Apr4g0041 4 396544 402845 PCT