Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0346 ATGGCGGAAGAAGAACAACAAGAGAAGCAGTATTGCCGTGGAATCCAAGTCCGCGCCATGCAATTCACTTACGATGTTCAACAACCACCGCTCTTCCTCGACTTCAACCTTAACGTCGCTCCCGGATCGCGATGCCTCCTCGTCGGTGCCAATGGATCCGGGAAAACGACTTTGCTGAAGATTCTAGCGGGGAAGCATATGGTTGGAGGAACAGACGTCGTGCGTGTGTTGAACTGTTCTGCTTTTCATGACACTAAACTCGTTTGTAGTGGAGATCTCGCTTATTTAGGGGAATCCTGGAGCAAAAACGTTGGTTCTGCTGGAGAAATTCCGCTCCAGGGTGACTTCTCTGCCGAACATATGATTTTTGGAGTTGAGGGCGCTGATCCTGAAAGGAGAGATAAGTTGATTGAGCTGCTTGATATAGACCTGCAGTGGCGAATGCATAAGGTATCTGATGGGCAGCGGCGTCGAGTGCAAATCTGTCTTGGTCTTTTATATCCATTTAAGGTTCTCTTGCTGGATGAGGTTACTGTTGACCTGGACGTTGTTACTCGGATGGATTTATTGGACTTCTTTAAGGAAGAATGTGAGCAGAGAGAAGCTACAATCGTATATGCAACTCATATTTTTGATGGACTAGAGACATGGGCAACTCATTTGGCATACATACAAGACGGTGAACTGAGAAGAGCAGAAAAAATATCAGATGTTAACGAGTTGAAGTCTTCAACTAATCTGCTGTCAGTTGTTGAGTCCTGGCTTCGTGCTGAAACAAAGCTTGAGAAGAAATCCCATGTTCAAAAGACTTCCTTTGCTAGCTCTCCGTTCTTTTCATCTAGACAAATGGCATACTATCGATAG 864 0.4537 MAEEEQQEKQYCRGIQVRAMQFTYDVQQPPLFLDFNLNVAPGSRCLLVGANGSGKTTLLKILAGKHMVGGTDVVRVLNCSAFHDTKLVCSGDLAYLGESWSKNVGSAGEIPLQGDFSAEHMIFGVEGADPERRDKLIELLDIDLQWRMHKVSDGQRRRVQICLGLLYPFKVLLLDEVTVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATHLAYIQDGELRRAEKISDVNELKSSTNLLSVVESWLRAETKLEKKSHVQKTSFASSPFFSSRQMAYYR* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0346 287 Pfam ABC transporter 34 178 IPR003439 GO:0005524
Apr8g0346 287 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 17 251 IPR003439 GO:0005524
Apr8g0346 287 SMART AAA_5 41 228 IPR003593 -
Apr8g0346 287 PANTHER ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED 2 287 - -
Apr8g0346 287 Gene3D - 12 273 IPR027417 -
Apr8g0346 287 PANTHER ABC TRANSPORTER I FAMILY MEMBER 21 2 287 - -
Apr8g0346 287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 240 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0346 Apr-Chr8 2929882 2933281 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0346 15 243 Calmodulin-binding Proteins AT2G36910 22.951 6.37e-09 55.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0346 8 2929882 2933281 Apr8g0346 8 2929882 2933281 ECH