Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0340 ATGGGCCTTAGAGACATTGGTGCTTCACTGCCTCCTGGCTTTCGGTTTTATCCGAGCGATGAGGAGTTGGTCCTTCATTACCTTTACAAAAAGATCACTAATGAGGAAGTTCTGAAGGGTACCTTAATGGAAATCGACTTGCACACGTGCGAGCCATGGCAGCTTCCTGAGGTGGCTAAGCTGAATGCAACTGAATGGTACTTCTTCAGCTTTCGTGATCGCAAATATGCAACTGGCTACCGGACCAACCGGGCAACAATATCTGGCTATTGGAAAGCAACAGGGAAGGATCGTACGGTGTTCGACCCAATGACTCGTGAGGTTGTAGGGATGAGGAAAACATTAGTGTTCTATCGGAACAGAGCTCCAAATGGCATCAAAACGGGTTGGATCATGCATGAGTTTCGCTTGGAGACCCCACACATGCCCCCTAAGGAGGACTGGGTTTTGTGTAGAGTGTTTCACAAAGGCAAAGCAGACAACAGTGCCAAACTCAACCCACAACTCATGTTTGAGACCACAACACTTCCATCCCTAACTTTGGCTTCGTCATCTCCAACCAACCAAACCACACCGGTTGGGTATAACCACAACAATTCTAATTTCATGAACATCCTTCAGTTTTCTAAGGAAACAAACACCAACTCTAGCAGTGTTACTCAAATTAGTCCTGATGATGGATATGGCTTCTTATGGAACATGGATATGGAAGAAAATAGCTTTCATGATGGCATGGACTCAAACTTGGATGGAATGAGATTCGAGGTGGATAATAATAGTATGGTCTTGATATAA 795 0.4491 MGLRDIGASLPPGFRFYPSDEELVLHYLYKKITNEEVLKGTLMEIDLHTCEPWQLPEVAKLNATEWYFFSFRDRKYATGYRTNRATISGYWKATGKDRTVFDPMTREVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKGKADNSAKLNPQLMFETTTLPSLTLASSSPTNQTTPVGYNHNNSNFMNILQFSKETNTNSSSVTQISPDDGYGFLWNMDMEENSFHDGMDSNLDGMRFEVDNNSMVLI* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0340 264 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 261 - -
Apr8g0340 264 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
Apr8g0340 264 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Apr8g0340 264 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Apr8g0340 264 Gene3D NAC domain 19 160 IPR036093 GO:0003677|GO:0006355
Apr8g0340 264 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0340 Apr-Chr8 2874083 2878775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0340 6 179 NAC Transcription Factor Family AT1G56010 53.297 2.42e-63 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr8g0340 NAM 4.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0340 - - gmx:100783645 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0340 8 2874083 2878775 Apr8g0340 8 2874083 2878775 ECH
Apr4g0037 4 355484 365585 Apr8g0340 8 2874083 2878775 PCT