Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0325 ATGGAAGAGGAATCAAAGAAAGACACTAAGCAAGAGTCACCAAAGGAGGCTCGGTATAGAGGAGTGCGGCGGCGGCCGTGGGGGAAGTTCGCTGCCGAGATTCGAGACCCGGCTCGGCACGGTGCCCGAGTGTGGCTGGGGACATTCCTCACGGCGGAGGAGGCTGCAAGAGCTTATGATCGTGCTGCTTTTCAAATGAGAGGTGTTACAGCCGTTCTCAATTTTCCAAATGAGTATCCTTCATGCTCTTCTATGAGTTCCCCTTCGTCACTGCCACCTTCCACTTCAACATCAATGCCCTCTTCTTCAATGGTTAAAAGTGATCATGGTAAACATGTTATTGAATTGGAGTGTTTGGATGACAAATTGTTAGAGGATCTTCTTGATTGTGATGAAAATGCCTTCGAGAAAGACTTCCCTAAGTAG 426 0.4836 MEEESKKDTKQESPKEARYRGVRRRPWGKFAAEIRDPARHGARVWLGTFLTAEEAARAYDRAAFQMRGVTAVLNFPNEYPSCSSMSSPSSLPPSTSTSMPSSSMVKSDHGKHVIELECLDDKLLEDLLDCDENAFEKDFPK* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0325 141 MobiDBLite consensus disorder prediction 80 106 - -
Apr8g0325 141 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Apr8g0325 141 SUPERFAMILY DNA-binding domain 18 77 IPR016177 GO:0003677
Apr8g0325 141 PANTHER DNA-BINDING DOMAIN 7 132 IPR044808 GO:0003700|GO:0009873
Apr8g0325 141 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Apr8g0325 141 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Apr8g0325 141 Pfam AP2 domain 18 68 IPR001471 GO:0003700|GO:0006355
Apr8g0325 141 MobiDBLite consensus disorder prediction 1 22 - -
Apr8g0325 141 PANTHER ETHYLENE RESPONSE FACTOR 7 132 - -
Apr8g0325 141 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
Apr8g0325 141 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Apr8g0325 141 MobiDBLite consensus disorder prediction 80 105 - -
Apr8g0325 141 CDD AP2 17 77 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0325 Apr-Chr8 2697577 2698002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0325 15 132 AP2-EREBP Transcription Factor Family AT3G23230 61.983 8.41e-45 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Apr8g0325 AP2 2.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0325 - - gmx:100810414 174.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0325 8 2697577 2698002 Apr8g0325 8 2697577 2698002 ECH