Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0319 ATGGAAAAATCCTTTGAGTCTCCGTCTCCATCTTGCAGAGGCAGATCCAAGAAGAAGCTTCATCTCCGAAGCTCTGAAGTTGAATCGCCAGATTCAGTTCAACTGAGCTCCAAGACGCCGGAGAAGAAGACACTGCAGCGCACGCGCAATCGCGGCGTTGCGCTCTCCGTCGCGGAAATCAGGAAGGTCGCTGAGCGCTTGCAAGATCGGAAGCAATGCAATGATACGACTTCGTCGCAGGTTAAATCTGCTAGGAGGCAAATTTCTTTGCCTTCCCCTAGTAAACCCAAGACTACTTCTGATGAATCACTCAAGCTACCCGAAAAGTATGAAATTTTGGGAGAGTTCTTCAACAACTTGGATAGTTCGATTCGATTATTGCGTTTGAAGGGATCGATGCCGTCCTTTACAAATATCAGTCCCAAGATTGAATGTTTAACTGATAGGAGGTTTACGCATGGCCATCTGGCCCAGATGAAATTTGTCTTACCCGAGGCTATTGTTATTAAGAAGGTGTTGGTGTTTGATGAACGGACAAGTTGTATGAAGCCGGATCTTCATGTTACTATAAATCCTGATGCGGTGGAATCTGACGCAAAGGCGTTGCCTCAATGCGGGAGTGTGTCGCTCAGGAAGTTGTTTCGCACACGGCTCAGAGATTTTTGTAAATCTCATCCTGAGGGTGATGAAATTCCAGAGGAAACACTGCCTGAGCCATTCAATCACCCAAAGAAAGACAGTATATTGGACATGTTGAAAACACGGTCCTCATCTCTGGCTACAGGGACATTATCTGATGCATGTGAAGCTCATTCTCCAGCAATTTTGACTCCATGTATGAAGAATAATGACGTTGCCAATGATGCAGAACCTGGTAGCATAGAAGAAAATTTGTCAGTGCCTATCACGACATCGGCTGAATTGCTTTACCAGCAGCCGGCAATAGCCTCTCATGTGCCTCAATCTTTTCGAAGGCAATTTTCTCAGAAATGTAAAGCGAATGGAGCAGATAACGTACAGCAAAAGTCTCCTTTAGATTCATTACCACCCCTGGCCTTTTCAGTTTCAGTGTCTAGCCCGAAGAAAAATCCGTCTGTTGATGGTACTAAATCTCATCTGAGAGCTTTCCCATCTAAGTTGGCTTCGGAAACAACTAGTAGTGGAAGGTGTATAGCTATGTGTGCCTCTTTGGAATCATCCAATGCTCCCCCTTGTACTCCAAGCAAAACCATTGAGCATAAAGAAAACAAAGATGGGTCTCTCGAAAGCATTGATGCCATGTCAACTCCAGCTAAATTTATTTCTACTCCGTCCAGGTTGATGACTGCCACACCTGCCTTGCCTTCACCCAAAAGACATTATATGAGCCCAAATGACAACTCTACTAGTTCTTTGAACAAGTTAGTTAGGCGTCCACCTCGTTCTAGGTCATTGAAATTTGACTCTCCAGTGAAGAATAAAGAGACTGTGAATGAAGACACTGCTGGTGCCTTACCAATAGATGATGATGTTTTTGAAATTCTCCCAGAAAATCTTATAAAATCGATTAGGGAAAAAGAAAAAATGGCAATGGAGGAAAGAGATCCTGCTATCTCACAAGCAAAGAGACGGAAAAAAATTATTGCCAGCCTACCTAAGCTGTTTAACATGATTCACCTCTTGTTTCACAAGCGTTCTGTTATCACTAAAGAGGAGCTTGTGAGCAAGATAATCTCAAACCACTGTGATATTGTTGACAGAAGTGAAGTTGAAGAACAGATGAATTTGTTGCAAGAACTAGTACCTGAATGGATTTCTGAGAAGTTGGCCTCTAGTGGGGATTTCCTAGTCTGCATAAATAAAATGTTGAACCCTGAAACTGTACGAGCATCACTTGAAGAAGCAAAGTGA 1890 0.4328 MEKSFESPSPSCRGRSKKKLHLRSSEVESPDSVQLSSKTPEKKTLQRTRNRGVALSVAEIRKVAERLQDRKQCNDTTSSQVKSARRQISLPSPSKPKTTSDESLKLPEKYEILGEFFNNLDSSIRLLRLKGSMPSFTNISPKIECLTDRRFTHGHLAQMKFVLPEAIVIKKVLVFDERTSCMKPDLHVTINPDAVESDAKALPQCGSVSLRKLFRTRLRDFCKSHPEGDEIPEETLPEPFNHPKKDSILDMLKTRSSSLATGTLSDACEAHSPAILTPCMKNNDVANDAEPGSIEENLSVPITTSAELLYQQPAIASHVPQSFRRQFSQKCKANGADNVQQKSPLDSLPPLAFSVSVSSPKKNPSVDGTKSHLRAFPSKLASETTSSGRCIAMCASLESSNAPPCTPSKTIEHKENKDGSLESIDAMSTPAKFISTPSRLMTATPALPSPKRHYMSPNDNSTSSLNKLVRRPPRSRSLKFDSPVKNKETVNEDTAGALPIDDDVFEILPENLIKSIREKEKMAMEERDPAISQAKRRKKIIASLPKLFNMIHLLFHKRSVITKEELVSKIISNHCDIVDRSEVEEQMNLLQELVPEWISEKLASSGDFLVCINKMLNPETVRASLEEAK* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0319 629 MobiDBLite consensus disorder prediction 454 470 - -
Apr8g0319 629 Pfam DNA replication factor CDT1 like 106 201 IPR014939 -
Apr8g0319 629 MobiDBLite consensus disorder prediction 1 52 - -
Apr8g0319 629 SUPERFAMILY "Winged helix" DNA-binding domain 101 240 IPR036390 -
Apr8g0319 629 CDD Cdt1_m 91 244 IPR014939 -
Apr8g0319 629 MobiDBLite consensus disorder prediction 446 485 - -
Apr8g0319 629 PANTHER DNA REPLICATION FACTOR CDT1 18 629 IPR045173 GO:0003677|GO:0030174|GO:0071163
Apr8g0319 629 MobiDBLite consensus disorder prediction 73 100 - -
Apr8g0319 629 Gene3D - 502 629 IPR038090 -
Apr8g0319 629 MobiDBLite consensus disorder prediction 27 41 - -
Apr8g0319 629 SMART CDT1_2 106 238 IPR014939 -
Apr8g0319 629 CDD Cdt1_c 502 626 IPR032054 -
Apr8g0319 629 Pfam DNA replication factor Cdt1 C-terminal domain 512 601 IPR032054 -
Apr8g0319 629 MobiDBLite consensus disorder prediction 68 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0319 Apr-Chr8 2664369 2671335 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0319 428 627 Core DNA Replication Machinery Family AT2G31270 51.402 3.36e-53 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0319 K10727 - gmx:100778818 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0319 8 2664369 2671335 Apr8g0319 8 2664369 2671335 ECH