Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0316 ATGGGTACCAACTTACACGAACTACTTAGAAGCTTCTGTTTGGGTACTGGTTGGAAGTATGCCATTTTTTGGAAGCTCAATCATCGTCCTCGGATGACTTTGACATGGGAGGATGCTTACTATGATAGTTCTGATTTTTATGACTCTTCTGAAAATAAGTACGGCCAAAAGACATTGGAGAAGATTGGCGGTGCGAATTTCTTGCATGACCCTTTAGGGTTAGCTGTGGCAAAGATGTCATATCATGTATATTTGTTAGGGGAAGGTATTGTTGGACATGTAGCCATTTCTGGAAAGCATAAGTGGATCTGTGTAGATAATCAAGTTACAAGTTTTGGCCCATTGTTTGAGTTTGCTGATGGGTGGCAATCTCAGGTTTCTGCTGGAATTAGGACCATTGCTGTTGTAGCGGTAGTCCCACTTGGAGTTGTTCAACTTGGCTCTTTAAATAAAGTTATTGAAGATATGGGGCTTGTAACCCATATTAAAAGTCTCTTTTCTACTCAAGATTACACAACAGGCTATGTTCCTAACCAAGTACAATGTAGTGTGAAGAGTTCTCCATCTGTGCTGGATGTATCCATAAAAACTTTGTCATTAGAAAGTATGCCTGCCAACTTACATGATACAGAGAAAACCATGAAATGTGAAACACTGGATGTTTCAATGCCCGTTCAATACTGCGGGAAGAACTATGCCCCTCATGCTGTTTACCAGGAAATGGCTGTTGATGTGGCCAAGAATGAGGGCCTTGAATTAAACAGCGATGAAAGTTCCATTTTGCCACAGTCAATGTCAAACATGACAAACAATAGTAGCTACAAAGATACAAGTTTGGAATCAGAAAAAAAGGTTTCATCATTTTTACACAATTTGGTTATGGACAATAATAATGTCGATGATTTAATATGTCCATTGGAAAAATTTGAAGTTGATTCTACATCCTTCCCTTTAGACTTTCTTGATCCAATCATTTGTGAGAGTGATAAGTTACATTATGTGGATATCAACCAAAAAGGGGTGTCAAATGTGCCAAAACCTTCATATGCAAACTCCCTAAAAAGTATTGAGAAATTAAAGTTTCAAACTGAAACTTGTAACAAGGATACCTCATATGCATTGAAGTTTCCTGCTGGCTATGAGTTACATGAAGCACTTGGACCAACTTTTCTGAAAAGGAGTAAATATTTTGATTGTGCAGCATTGGCAAATCAAGATGTTAAAACTTCTGAGTTGTCGGACGAGATTAGTTGTAGCCAATTGACTTCTGAATCTTGCCCAGAAGATCTTTTAGAAGCTATGGTGGCTAACATTTGCCATAGTAATAATAATGTTAATTGTGAGTTATCATTTTCTACATCATTGGAAGCTACAATGGCCTCAGGAAGAAATCTCATAAGTTCTATTCACACTCTGCAAAATATTAATGCAGAAGACTATGCAATAGATCAGCACCCTCATGCTAGAGAGGAGACACATCATAGTCTGAGTTCACCAGGGATATGCTGTGTGGTATCTCCAAAAGATTTTTCTTCTACATGTCGTAGTTCATGCAGTGAACAATTTGAGAGCTTTTTCAAATCAACTAAGAACTGCAAGAAGAGAGCTAGGCCTGGTGAAAGTTGTAGGCCTCGGCCAAGGGATAGACAACTGATCCAAGACCGTATTAAGGAGTTGAGGGAACTGGTACCAAATGGAGCAAAGTGCAGTATTGATTCACTACTGGAGTGCACCATAAAACACATGCTCTTTCTCCAGAACATTACTAAACATGCTGACAAGCTAAATAAATTTGCAGATACAAAGACGAAGGTGAGGTTTAATGACATCCATGGATCATCTAGTTATCAGCATGGTTCAAGTTGGGCAATGGAGGTAGGAGGCCATCTTAAAGTTCATTCAATATCAGTGGAGAATCTTAGTAAAAGTGGTCAGATGCTTGTTGAGATGTTATGTGAGGAGTGTTGCCATTTTCTTGAGATAGCAGAAGCCATCAGGAGCTTAGAGCTGACAATTTTGAATGGTGCAACAGAAGCTCATAGTGAGAAGACGTGTATATGTTTTGTGGTTGAGGTCCAAAACAATAAAAATTTACACAGATTGGATATCTTGTGGCCGCTTGTTCAATTACTGCAATCCAAGAGCACAACGTTTTCATAA 2160 0.3875 MGTNLHELLRSFCLGTGWKYAIFWKLNHRPRMTLTWEDAYYDSSDFYDSSENKYGQKTLEKIGGANFLHDPLGLAVAKMSYHVYLLGEGIVGHVAISGKHKWICVDNQVTSFGPLFEFADGWQSQVSAGIRTIAVVAVVPLGVVQLGSLNKVIEDMGLVTHIKSLFSTQDYTTGYVPNQVQCSVKSSPSVLDVSIKTLSLESMPANLHDTEKTMKCETLDVSMPVQYCGKNYAPHAVYQEMAVDVAKNEGLELNSDESSILPQSMSNMTNNSSYKDTSLESEKKVSSFLHNLVMDNNNVDDLICPLEKFEVDSTSFPLDFLDPIICESDKLHYVDINQKGVSNVPKPSYANSLKSIEKLKFQTETCNKDTSYALKFPAGYELHEALGPTFLKRSKYFDCAALANQDVKTSELSDEISCSQLTSESCPEDLLEAMVANICHSNNNVNCELSFSTSLEATMASGRNLISSIHTLQNINAEDYAIDQHPHAREETHHSLSSPGICCVVSPKDFSSTCRSSCSEQFESFFKSTKNCKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLECTIKHMLFLQNITKHADKLNKFADTKTKVRFNDIHGSSSYQHGSSWAMEVGGHLKVHSISVENLSKSGQMLVEMLCEECCHFLEIAEAIRSLELTILNGATEAHSEKTCICFVVEVQNNKNLHRLDILWPLVQLLQSKSTTFS* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0316 719 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Apr8g0316 719 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 536 585 IPR011598 GO:0046983
Apr8g0316 719 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 272 718 IPR043561 GO:0003700|GO:0006355
Apr8g0316 719 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 270 IPR043561 GO:0003700|GO:0006355
Apr8g0316 719 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 272 718 - -
Apr8g0316 719 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0316 Apr-Chr8 2643903 2649277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0316 1 715 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 39.896 2.55e-149 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0316 - - gmx:100777740 975.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0316 8 2643903 2649277 Apr8g0316 8 2643903 2649277 ECH
Apr4g0017 4 175064 181861 Apr8g0316 8 2643903 2649277 PCT