Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0294 ATGGAAGAGGTTGAACAAGCTAACAGAGCAGCTGTTGAAAGCTGTCATAGGGTTCTAAGTTTGTTGTCTCAGGCCCGGGATCAGGTTCAGCATAGGAATTTAATGGTGGAAACTGGGGAAGCTGTGGTGAGGTTCAAGAAAGTTGTTTCCTTGCTTCATAATGGTTTGGGTCATGCAAGAGTGAGGAAGTGTAAAAACCTTCAAGTCCCTTTTTCCCAGAATATCTTTTTAGACAACCCAAATTGCAAGACCAACCATCACCCAAAAAATCTTCAGTTTGCACAAACCAGCTTTCATGATAATTCAATTCAGGAACTGGGTTCAACCATAAAAAACTCACTCTCTCTGGGACAACCATCTTTGGAATTGAGCTCTAGTGGGAAAAGTCCTCTTCACCTTGCACATCAAGCTTCATCAACTCACTATCACCTCTTTCAGCAACGGCAACAACAGCAAAGGTTGCTGCTGCAGCAGCAACAAATGAAGCATCAAGCAGAAATGATGTTCCGAAGGAACAACAGTGGCATAAACCTGAATTTTGATAGCACTAGCTGCACACCAACAATGTCATCTACTAGGTCTTTTATTTCTTCCTTGAGCATAGATGGAAGTGTGGCTAGTTTGGATGGAAGTGCCTTCCATCTAATAGGAGCTCCACACTCTTCTGATCAGAATTCACAACAGCATAAGAGAAAATGTTCTGCCAGAGGTGATGAGGGTAGCTTGAAATGTGGGAGCAGTGCTAGATGCCATTGCTCTAAGAAGAGGAAACATAGAGTGAAGAGATCTATTAAGGTGCCTGCTATCAGCAACAAACTTGCAGACATCCCTCCTGACGATTATTCGTGGAGGAAGTACGGGCAGAAACCAATCAAGGGTTCACCTCACCCTAGGGGATATTACAAGTGCAGCAGCATGAGAGGCTGTCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGAAGAGCCAACCATGCTAATTGTTACCTATGAAGGAGAGCATAACCACCCTAAGTTACCAACACAATCTGCAAATGCATGA 1038 0.4393 MEEVEQANRAAVESCHRVLSLLSQARDQVQHRNLMVETGEAVVRFKKVVSLLHNGLGHARVRKCKNLQVPFSQNIFLDNPNCKTNHHPKNLQFAQTSFHDNSIQELGSTIKNSLSLGQPSLELSSSGKSPLHLAHQASSTHYHLFQQRQQQQRLLLQQQQMKHQAEMMFRRNNSGINLNFDSTSCTPTMSSTRSFISSLSIDGSVASLDGSAFHLIGAPHSSDQNSQQHKRKCSARGDEGSLKCGSSARCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPTMLIVTYEGEHNHPKLPTQSANA* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0294 345 ProSiteProfiles WRKY domain profile. 272 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr8g0294 345 SMART WRKY_cls 277 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr8g0294 345 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 344 IPR044810 GO:0003700
Apr8g0294 345 SUPERFAMILY WRKY DNA-binding domain 275 337 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr8g0294 345 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 2 344 - -
Apr8g0294 345 MobiDBLite consensus disorder prediction 218 239 - -
Apr8g0294 345 Pfam Plant zinc cluster domain 230 275 IPR018872 -
Apr8g0294 345 Gene3D WRKY domain 262 339 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr8g0294 345 Pfam WRKY DNA -binding domain 279 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0294 Apr-Chr8 2452051 2454509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0294 1 342 WRKY Transcription Factor Family AT2G30590 57.256 2.05e-131 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr8g0294 WRKY 4.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0294 - - gmx:100170681 622.854