Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0288 ATGGCACTGAGCAGGAATTCTTCAAAAAAATCAGAATGGAAGTACCATGTTTTCTTGAGTTTTAGGGGTGAAGATACCCGCTTTGGTTTCACCGATCATCTATATGCAGCCTTGCTTCAGAAGGGTATCAAAACATTCAGAGATAATGATGAACTTACAAGAGGTGAAGTTATCTCCGAAGAGCTTCTTTGTGCAATTGAGGAATCTCTATGTGCAATCATCATAATCTCCCAAAATTACGCTTCTTCCACGTGGTGTTTGGATGAGCTACAAAAGATTGTTGAATCCAAAAATAGTTTGGGCCGAGAAGCGTTTCCAGTTTTCTACCGTGTGGATCCCTCTGATGTACGACATCAAAAGGGAAGTTTTGCAGAAGTTTTTGAAAAACATGAAGAAAACCTTGTAGAAAACAAAGGAAGAGTGCAGAAGTGGAGAAAAGCTTTGCAAGATGTTGCTGGCTTATCTGGCTGGGACTCTAGGAATCGGTATGAATCAGACCTTATTGAAGAAATTGTTACAGAAGTGTGGAGAAAACTAGAACCTAAATTGCCAGTGTTTAATGACGGACTAGTTGCAATTGATACAAAAGTAGATGAAATGTATTCACATTTAAGGCCAGGTTCTGAAGATGTCTGCTTTATTGGCATATGGGGAATGGGTGGTATAGGAAAAACAACTCTTGCCAATGTTATCTTGAAGAAAATCCGAAGTCAATTTGATGTGAGTTGCTTTCTTGCCAATGTTAGAGAAGCTTCAAAAGAAGGAGATCAAGGTCTAGTTCTCCTACAAAATAAGCTTCTTTCACATATGAAACTAAAGAGCATGATAATTGAAACTTCAGACCAGGGAAGGGATAGCATCAGGAACTGTTTACACAACAAAAAAGTTCTTCTTGTCCTTGATGATGTGAGTGACAAAAAACAACTAGAGAATTTGGCTGGAAACCAAAAATGGTTTGGACCAGGAAGTAGAATAATTGTTACAACTAGGGACAAACACCTCCTGACATCACATCGAGTATTGTTTGAACTGTATGAGATGAAAACCTTGAATACTGATGAATCTTTTCAGCTCTTTTCTGATAAAGCATTTGAAGGACACCAACTAAACGAAGATTATTTGGAGTTGTCAAGAAAGGTAGTTGAATATTCTGGAGGCCTTCCTTTGGCACTTGAAGTGCTAGGTCGTTTCCTCTCTGGAAGAAGTATACATGAATGGAAAGATGCTTTAATTAAGATAAGTAAAACTCAACACGATGATATAATGAGTAAACTAAAGATAAGTTATGACATGTTGGAAGAGGAGTACAAGACTATATTTCTTGATATTGCTTGCTTTTTTAAGGGATGGTACAAAGACAAGGTGACAAAGATATTGGGCCATTGTGGTTTTCATTCAACTATAGGAGTAAATGTTCTTATTGAAAAATCGTTGATAACTTGCAAAGACGGAATTCTATGGATGCATGATACAGTTGAAGAAATGGGCAAAACAATTGCTTTCCAGGAATCTCCAAATGATCCTGGTAAACGCAGTAGGCTTTGGTCTCAAGAGGATATCAACGAAGTGTTGAGAACAAATACAGGAAGTGAGAAAGTTCAAGGAGTAGTTTTGAAGCAACAAACAGAGTCATTTGAAGAACAATGGCACCCTGGAGCCTTCTCTATGATGTGTAACCTTAAATTACTCATCATGTTATGTGATTTGCACCTTCTGCGCAGTCTTAAATGTCTTCCTAGCTCTTTAAAGGTTCTAATATGGACAGAATATCCTTTCAAAGCTCTACCGCATGGTGCACAACTGCATGAACTCGTTCACTTGCAAATGAGTAACAGCAGATTAGTAAAACTTTGGAATGGAAATCAGTTTTTTGGGAAACTGAAAGTTATCGATTTGAGTTATTCCAACTATTTGATTCACACACCAAATATTTCTGGTGTACCAAATCTTGAAGAGCTCTTCCTTGATGGTTGTGTGTCGCTCATTGAAGTTCACGAATCCATTGGGCAGCATAAGAAGCTTGCGGTACTGAGCCTGATAGGATGCATAAAGCTTAAAACTCTGCCACGTAAATTGGAAATGAGTTCCTTGAAAAGGTTATTTCTTTGTGGCTGCTTAAACATCAGGAAACTTCCTGATTTTGGGGAGAATATGGAATGCTTATCAGTGTTGAATTTGATGAATTGCTCAAATCTTCTTTGCCTTCCAAATACCCTTAGTAATTTGAAGTCACTCAAGCATTTTAATTTATCTGGATGCTCAAAAGTCTGTGTACTGCCAGTAAATATAAATGAAAATGAGGCTTTGGAGGATCTTGATCTAAGCAAAACCTCTATTAGAGAAGTGAATGCATCCCTTTTTCATTTGAAAAATCTCAAAAGGCTTTCATTTCGTGGATGCAGTGGGCCAGTATCCAACTCTAGTGAGAAACCAGCTCCCAAATACCTAGTACTGCCTGCTTCTGTCTCAGGACTTTCCTCATTAGTTACTTTTGATTTAAGCTATTGCAATCTCTATGGTGAATTAATTCCTGAAGATCTTGGCAACCTATCATCGCTGGAGACATTAATTTTAAGTGGGAATAAAGATCTTGTGCTACCTGCTGCCAGCATTGCTAATCTTTCCAAGCTATGCTTTCTTGAGTTAGAAGGTTGCAGGAGCTTTGTTGATGGATCTGTGCTTCGGCATCTGGTAGATTTTCCTGTGGAAGCTGGCTTATTCTTGGATCTATGGGAGTTTTGGAAGCTATTTGAGTCCCATGACAGTGAGCTTTTATGTCAGGTTAGGGATCCGAGTTATCCTATTATTTACCTTGAAATTCCTCCAAAGTTTGGTAATGAGATATTTTTTCCTGTGGGTTCGCATTTGTCAAAAATTGAATCAAGTGCATCAATACTAGTGGACATCCCTAAGGAATGTAGCACGGGTGAGTGGTGGGGAATTGTTGTATTCATTGCATTCGAACCTTCAACATTGCCAAGTTTCAAGATAGAGCTCTCCTGGAATTTTGAAGCTTCCCATCCTGAAGCTGGCCGCTCCTTATATCTCTCCTCCTACGCAGAAGCGCATTATAACAGTTGCCTTGTTACAATGATAGTGAATGATAGCTATATATACATTCAGCTGCATCACAGAAGATACCACAATATAATTGAATCAAAGGATTTTAGCAAGCATCGGAACCCTGAATTCAGTGAAATAAGTAGGTTGCGTTTTGATGTACGAGGGAAACAGCAAAAAATAAAAAAGTGCGCGTATAATGTGTTAAGTAAGGAAGATTTTAGACCTGAAGCATTGCTAAAATATCACAACAGGAGTGTTGATGAACCTAATTTTGAGAACTCCAGTGGTCTCAATAATTCAGATGCAGAATTCGGGGGAGAAGATGCAAATGCTTCAAATGAAAGTTATTCCAGTGACTCATCTGTGGATGCTCCAGAGTTGAAAAGAAGCCTTAGTTCGCCACTGTGA 3471 0.3852 MALSRNSSKKSEWKYHVFLSFRGEDTRFGFTDHLYAALLQKGIKTFRDNDELTRGEVISEELLCAIEESLCAIIIISQNYASSTWCLDELQKIVESKNSLGREAFPVFYRVDPSDVRHQKGSFAEVFEKHEENLVENKGRVQKWRKALQDVAGLSGWDSRNRYESDLIEEIVTEVWRKLEPKLPVFNDGLVAIDTKVDEMYSHLRPGSEDVCFIGIWGMGGIGKTTLANVILKKIRSQFDVSCFLANVREASKEGDQGLVLLQNKLLSHMKLKSMIIETSDQGRDSIRNCLHNKKVLLVLDDVSDKKQLENLAGNQKWFGPGSRIIVTTRDKHLLTSHRVLFELYEMKTLNTDESFQLFSDKAFEGHQLNEDYLELSRKVVEYSGGLPLALEVLGRFLSGRSIHEWKDALIKISKTQHDDIMSKLKISYDMLEEEYKTIFLDIACFFKGWYKDKVTKILGHCGFHSTIGVNVLIEKSLITCKDGILWMHDTVEEMGKTIAFQESPNDPGKRSRLWSQEDINEVLRTNTGSEKVQGVVLKQQTESFEEQWHPGAFSMMCNLKLLIMLCDLHLLRSLKCLPSSLKVLIWTEYPFKALPHGAQLHELVHLQMSNSRLVKLWNGNQFFGKLKVIDLSYSNYLIHTPNISGVPNLEELFLDGCVSLIEVHESIGQHKKLAVLSLIGCIKLKTLPRKLEMSSLKRLFLCGCLNIRKLPDFGENMECLSVLNLMNCSNLLCLPNTLSNLKSLKHFNLSGCSKVCVLPVNINENEALEDLDLSKTSIREVNASLFHLKNLKRLSFRGCSGPVSNSSEKPAPKYLVLPASVSGLSSLVTFDLSYCNLYGELIPEDLGNLSSLETLILSGNKDLVLPAASIANLSKLCFLELEGCRSFVDGSVLRHLVDFPVEAGLFLDLWEFWKLFESHDSELLCQVRDPSYPIIYLEIPPKFGNEIFFPVGSHLSKIESSASILVDIPKECSTGEWWGIVVFIAFEPSTLPSFKIELSWNFEASHPEAGRSLYLSSYAEAHYNSCLVTMIVNDSYIYIQLHHRRYHNIIESKDFSKHRNPEFSEISRLRFDVRGKQQKIKKCAYNVLSKEDFRPEALLKYHNRSVDEPNFENSSGLNNSDAEFGGEDANASNESYSSDSSVDAPELKRSLSSPL* 1157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0288 1156 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 443 IPR027417 -
Apr8g0288 1156 SUPERFAMILY L domain-like 488 887 - -
Apr8g0288 1156 Gene3D - 181 341 IPR027417 -
Apr8g0288 1156 ProSiteProfiles TIR domain profile. 13 179 IPR000157 GO:0007165
Apr8g0288 1156 Pfam TIR domain 14 184 IPR000157 GO:0007165
Apr8g0288 1156 Gene3D Ribonuclease Inhibitor 808 900 IPR032675 -
Apr8g0288 1156 MobiDBLite consensus disorder prediction 1110 1156 - -
Apr8g0288 1156 Gene3D - 349 433 IPR042197 -
Apr8g0288 1156 Gene3D Ribonuclease Inhibitor 568 807 IPR032675 -
Apr8g0288 1156 Gene3D - 8 180 IPR035897 -
Apr8g0288 1156 Pfam NB-ARC domain 194 431 IPR002182 GO:0043531
Apr8g0288 1156 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 627 IPR044974 GO:0006952
Apr8g0288 1156 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 707 801 IPR044974 GO:0006952
Apr8g0288 1156 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 157 IPR035897 -
Apr8g0288 1156 MobiDBLite consensus disorder prediction 1131 1156 - -
Apr8g0288 1156 PRINTS Disease resistance protein signature 213 228 - -
Apr8g0288 1156 PRINTS Disease resistance protein signature 290 304 - -
Apr8g0288 1156 PRINTS Disease resistance protein signature 384 398 - -
Apr8g0288 1156 PRINTS Disease resistance protein signature 848 864 - -
Apr8g0288 1156 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 707 801 - -
Apr8g0288 1156 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 9 627 - -
Apr8g0288 1156 SMART till_3 14 154 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0288 Apr-Chr8 2403578 2409711 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0288 11 797 WRKY Transcription Factor Family AT4G12020 31.030 6.07e-99 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0288 - - adu:107489070 1303.12