Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0279 ATGGCCAATCACCCCTCCGAGGCCACCACCGACGACTTCTTCGAGCAAATCCTTGGCCTTCCCACCTTCGCTTCCACCGACTCTGCCTTGCCCCCTACCGATGCTTCTCCGATGATGCTTCAGCTCAACTCCGCCGACGCCGCCACCCACCTCGCCGCCGGCACAGCCTTTCACGCACCGCCTTACCAGTTGGGACTCAGCTTGGACCAAGGTAAAGGTACCTTCGAGGATGCTTCTGGAAGCGGCAAGCGCTTCCGCGACGACGTCGTCGATACCAGACCCAAGAATGTTTTTCATGGGCAACCCATGCCTACTACCGTTCCTACTGCTCCACATCCGCCAACAATGCGACCTAGGGTGCGAGCCAGAAGAGGACAGGCTACAGATCCACACAGCATAGCTGAAAGGTTGCGCAGAGAAAGAATAGCTGAAAGAATCAGGGCTTTGCAAGACCTGGTTCCTAGTGTCAACAAGACAGATAGAGCTGCCATGCTGGATGAAATTGTGGATTATGTCAAATTCTTGAGGCTTCAAGTGAAGGTTTTGAGCATGAGTAGATTGGGTGGAGCGGGTGCAGTGGCACCACTGGTAACTGACATCCCATTATCGTCAGTCGAGGAAGAAGGGAGTGAGGGTGGAAGAAACCAACCAGCGTGGGAGAAGTGGTCAAATGATGGCACAGAAAAACAGGTAGCTAAGCTTATGGAAGAAAATGTTGGGGCTGCCATGCAGTTTCTTCAATCAAAGGCTCTCTGCATCATGCCTATATCACTGGCATCAGCTATATACCCGTCACAACCGTCAGATAGCTCCAGTATAGTTAAGCCTGAAACTACTCCTCCTTCATAG 849 0.5241 MANHPSEATTDDFFEQILGLPTFASTDSALPPTDASPMMLQLNSADAATHLAAGTAFHAPPYQLGLSLDQGKGTFEDASGSGKRFRDDVVDTRPKNVFHGQPMPTTVPTAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQDLVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEGGRNQPAWEKWSNDGTEKQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYPSQPSDSSSIVKPETTPPS* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0279 282 Pfam Helix-loop-helix DNA-binding domain 131 175 IPR011598 GO:0046983
Apr8g0279 282 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 7 271 - -
Apr8g0279 282 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 271 - -
Apr8g0279 282 SMART finulus 132 181 IPR011598 GO:0046983
Apr8g0279 282 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 124 185 IPR036638 GO:0046983
Apr8g0279 282 Gene3D - 121 183 IPR036638 GO:0046983
Apr8g0279 282 MobiDBLite consensus disorder prediction 94 130 - -
Apr8g0279 282 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 126 175 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0279 Apr-Chr8 2327188 2331054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0279 57 281 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 79.149 4.96e-114 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr8g0279 HLH 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0279 - - gmx:100793177 464.922