Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0271 ATGAATCGGCTACTACCATCAAGCCTAGTGCCAGATGAAACAAGCCCCGAATGGATGAACAAGGGGGATAACACGTGGCAGCTAACGGCAGCTACTCTTGTTGGGCTCCAAAGTGTTCCGGGTCTTGTTATACTCTACGGTAGCATAGTTAAAAAGAAATGGGCCTTGAACTCGGCATTCATGGCACTGTACGCATTTGCTGCGGTTTTGGTTTGTTGGGTGGGGTGGTGCTACCAAATGTCGTTCGGTGAGAGGATTTTTCCGTTTCTGGGTCGTCCAAACGTGGCCTTGGATCAGAAATTCCTTCTGCGCCAAGCTTTTTCAGGGAACTTTCCCAATGCCACCATGGTTTACTTTCAGTTGGTTTTCGCGGCTATCACGTTGATTCTCATAGCAGGAGCGTTGCTTGGGAGAATGAACCTTCATGCGTGGATGTTGTTTGTTCCTCTCTGGCTCACCTTCTCTTACACCGTTTGTGCCTTCAGTATATGGAGCACTGATGGATGGTTATTCAAGATGGGTCTCATTGATTATTCTGGTGGCTTTGTTGTTCACCTTTCTTCTGGGGTAGCCGGTTTCACCGCAGCATCCTGGGTTGGACCAAGGGCAATGAAGGATAGAGAGAGGTTTCCTCCAAACAACATACTTCTAATGCTGGCTGGGGCTGGCTTACTATGGATGGGATGGACTGGATTCAACGGTGGAGATCCTTACACAGTGAGCATAGATGCATCTCTTGCCGTCCTTAACACCCACGTGTGCACGGCCATGAGCTTGTTGACTTGGCTTCTCCTTGACATCCTCTTCTTTGGAAAGCCTTCTGTGATTGGAGCCACTCAAGGCATGATCACTGGCTTGGTTTGCATCACACCAGCAGCTGGTGTGGTGCAAGGTTGGGCAGCAATGATAATGGGAATGATGTCTGGAAGCATCCCATGGTACACAATGATGGTCCTCCACAAAGAAATTAAGCTCCTAAAACAGGTGGATGATACTATGGCAATATTCCACACCCATGCTGTGGCTGGTTGCTTAGGTGGCATTCTAGCTGGCTTCTTTGCTGACCCTAAGCTTTGCCGTCTCTTCTATCAGGTACAAGATTGGCAACACTATACTGGCCTTGCTTATGGCATATTGACAGGGAGGGCCAAGGCAGGGTTCAAGCAAATGGGGGTTCAGTTCCTTGGCATTGTTTTTGTGATACTTCTCAATGTCACCACTACTACCATTGTGTGTCTCTTGGTTAGGACCATAGTTCCATTGAGGTTATCCGAAGATGACTTGCATGTTGGGGATGATGCTGTGCATGGTGAGGTTGCCTATGCATTGTGGGGCGATGGAGAGAGACTTGAGACTACCAATGTTGACACTACGAATTTTGATGAAAGGAATAATCGTCAATGGCCAACTTTGGAGCTAAAAAATTCGAATGATGTTCAATTGAAATGA 1449 0.4748 MNRLLPSSLVPDETSPEWMNKGDNTWQLTAATLVGLQSVPGLVILYGSIVKKKWALNSAFMALYAFAAVLVCWVGWCYQMSFGERIFPFLGRPNVALDQKFLLRQAFSGNFPNATMVYFQLVFAAITLILIAGALLGRMNLHAWMLFVPLWLTFSYTVCAFSIWSTDGWLFKMGLIDYSGGFVVHLSSGVAGFTAASWVGPRAMKDRERFPPNNILLMLAGAGLLWMGWTGFNGGDPYTVSIDASLAVLNTHVCTAMSLLTWLLLDILFFGKPSVIGATQGMITGLVCITPAAGVVQGWAAMIMGMMSGSIPWYTMMVLHKEIKLLKQVDDTMAIFHTHAVAGCLGGILAGFFADPKLCRLFYQVQDWQHYTGLAYGILTGRAKAGFKQMGVQFLGIVFVILLNVTTTTIVCLLVRTIVPLRLSEDDLHVGDDAVHGEVAYALWGDGERLETTNVDTTNFDERNNRQWPTLELKNSNDVQLK* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0271 482 PRINTS Rhesus blood group protein signature 120 136 IPR002229 GO:0005887
Apr8g0271 482 PRINTS Rhesus blood group protein signature 216 234 IPR002229 GO:0005887
Apr8g0271 482 PRINTS Rhesus blood group protein signature 247 269 IPR002229 GO:0005887
Apr8g0271 482 PRINTS Rhesus blood group protein signature 302 320 IPR002229 GO:0005887
Apr8g0271 482 TIGRFAM amt: ammonium transporter 23 441 IPR001905 GO:0008519|GO:0016020|GO:0072488
Apr8g0271 482 PANTHER AMMONIUM TRANSPORTER MEP2 5 461 IPR001905 GO:0008519|GO:0016020|GO:0072488
Apr8g0271 482 Pfam Ammonium Transporter Family 26 441 IPR024041 GO:0008519|GO:0016020|GO:0072488
Apr8g0271 482 Gene3D Ammonium transporter AmtB like domains 8 444 IPR029020 -
Apr8g0271 482 SUPERFAMILY Ammonium transporter 18 423 - -
Apr8g0271 482 PANTHER AMMONIUM TRANSPORTER 4 MEMBER 1-RELATED 5 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0271 Apr-Chr8 2224159 2226062 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0271 114 470 Inorganic Solute Cotransporters AT2G38290 57.703 8.90e-139 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0271 K03320 - gmx:112999382 800.045