Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0261 ATGATTCGGAAGCTACTGTCACAGCACCTATTATTCGCGTTAGGGTTTCTTCTCTCAGCCACAATCCCCTTCGCGCACGGCGAATCGTCTACGTGCTTGACGGTCTACAAGAACGGCGGTGCTCCCGCAGTGTTCCAATCTCCAAAATGCCCTCGCTGGAAGCTCTCCGATTACGATTCCCCTCCCCAAACCACCGCGCGTTGCCAGTCCGCAATGCTTCAAGGCCGCAGAAACTCCCAAGAGGATCGCACTCTTTGCGTCCTTGATGTTCGCATTCCCTTCCCCGGTGCGAACGGGATCAAGGAGGTTGTGGTAGGGATCGTGGCCGTTTTCGATGGTCATAACGGTGCAGAAGCTAGTGAGATGGCATCGAAACTTTTGGTGGAGTATTTCGTTCTGCATACTTATTTTCTTCTTGATGCCACGTTTTCTGTTATATCCAAGACGTCAACCGGAACTGTGCTTCACAAGAGAGACCGTGATCATGTAAACCTGCTGCATAGATGGAAAGAAATTCTAGGCTGGCAGCAGCAAGAACTGCATTTTGAAAGGTTTCAGAATACATTTTCAGCAAATTTTGATGATTCTTTTCACTTGGAAATTTTGAAGGAAGCATTGTTGAGAGCAATCCATGACATAGATGCTAATTTTTCAGAGGAAGCCTCTAGAAATAATCTTCATTCAGGATCTACAGCAACTGTTGTTTTGGTCGCAGATGATAAAATTTTGGTTGCCAACATTGGAGACTCTAAGGCATTCTTGTGCTCTGAAAAATTTCAGTCTCCCAAAGAGGCTAAAGACTCGTTATTAAAGCTATATAGGCAGAAAGAGCTTGACAGTTCTCTTTCTGTGTGGGATCGTGAAAAGTACAGATTAGCTTCCTCCCATGGACTCACTCATTTTGCAGTAAAGGAATTGACCAGTGATCATCATCCGGATAGAGATGATGAAAGAATTCGGGTGGAAACAGCTGGTGGTCAAGTTCAAAATTGGGGTGGTGTGCCTCGCATAAATGGTCAGCTGGCTGTTACACGAGCTATTGGTGATGTACACTTTAAAAGTTATGGTGTTATATCTGCACCGGAAGTGACTGATTGGCAGCCTCTGACTGCTAATGATAGCTATTTGGTGGCAGCATCTGATGGTGTATTTGAGAAGATGAGTGTGCAAGATGTCTGTGATATTTTATGGGAAGTTCACCGTTTCAGTAATATGAGATCAGAGTGTACCCCTTCATCTTCATATTCATTGGCAGATTTTATTGTTAATACTGCCGTAAAAAAGGGCAGTATGGATAATGTGGCAGCTGTTGTTTTTCCTCTGGAGTCTGCCAAATCTTCTGCAAACTTGTTCAGGGGAAGCTATATTGAAAAGAGGGATGCAGGTTTCTCATTATTTGGTCTTCAGGAACCTGCTTCAAGCTCAGTTAATGACATCAAATCTGATCTAATGCAATTGGAGCATCCTCATCTGGTAGATACCAAGTTTAAGCGAATATTGGTTGAAGTGAAAGATGGTGATTTTGGATGTTTTTATTTATCTGAAAATCTTGATGAACCAGTGGATTCTAAGCCTATTGCCAAAAAACCTGAATGGGAAGACTATTTATATGAACTACCTCAGCCTCTAGATGCTCTTCATCAACATGCTGATTCAGGTGGTCCTGTATATTTATACAATAACCAAGACTTTTGCTTTCACCTTGGTCCAAATGTTAACAAAGCCAAAGACCAGTGCATAAATCCGGAAGGCTTTGCCAGTTTTATCGGTCTTCTTGAATCAATTCCTTTACATGATGCTGGTTCCAGTAATGAATCTTCTGATTCAATGCCTGATTTGAGGTATGTATTGAAGAAGAGTTTTGGACGTGGATCATATGGTGAAGTATGGTTGGCTTTTCACTGGAATTGTAATCAGGATAGTAATGCTGCAAAAATGAGCAAGGATGGCAATAACAAAAACAGCAGCTCTACTGCTTCTAATTGTCAGGATGGTCCTTCTAACTACACCCAGTACATATTGAAACGGATAATGGTAGAGAGAGGGTCTGCTGTTTACTTAAGTGGGCTGAGGGAGAAATATTTTGGAGAAATTTTCTTAAATGCCTCTACATGCATTGAGAATCTTTTCTCGGATGGAAAATCAAACTGTGTCTTGGAAACATCACAATTTGGTTCTGAAAATTCATTTCCAAACAAATTTTGGCTGCAAAGAGTCTCATACGAAGAAGGTTTGAACCATATTGCAAGATATGTGGAGTCTTTTGAGTCTCAAGCCAATGAAATATGGCTTGTATTTAGTTATGAAGGCGTGTCATTGACAAAACTTCTATATACCGTGGAAGATGGATTTGGTACTACTGAGAAAGAAAGAGTTGAGCAAGTAGAACATGTTCAAATAATACGTCCATCAAAGTGGTGGCATTGGTTGAAAACGACAGAAGAAGGGCAAGAGGAAATGCGCAACCTTATCTGGCAGCTGTTATTAGCTCTGAAGTCCTGTCATGATCGCAACATCACACACAGGGATATTAAACCTGAGAATATGGTGATATGCTTTGAAGATCAGGAGACAGGGAGATGCTTGAAAGGGATTCCAACTAAAACTAATAATTTTTCTACCAAAATGCGAATTATTGATTTTGGAAGTGGAATTGATGAATTCACATTAAAGCATTTATATGGTTCCACTGGGCCGTCTAGAGCTGAACAAACTTATGAGTATACAGCTCCTGAAGCTTTACTAAATGCTACATGGTATCAAGGGCCAGCAAGCTCAACTTTGAAATATGACATGTGGAGTGTTGGTGTTGTGATGTTAGAGTTGGTCTTAGGAACACCAAATGTTTTTCAGATAAATGCCTTAACCCGTGCTCTTTTGGACCGGCATCTTGAAGGTTGGAATGAGGGTGTGAAGGAGCTAGCATATAAACTTAGATCATTCATGGAATTGTGCATTTTAATCCCTGGGATTTCCGGCAGTTCCTCAAAAAAGTATCACCCAGTGAACCAAGTTGGAGTTTCACCTGCTTCCTGGAAATGCTCTGAAGAATTCTTTTCTCATCAAATTAAGAATCGAGATCCTCTGAAAATAGGTTTTTCAAACATCTGGGCTTTACGACTAGTGCGTCGTCTGTTACACTGGGATCCAGAGGATCGGCTAAGTATTGATGAGGCTTTGCAACACCCCTATTTCCAACCTACCCCAAGAGGATGA 3216 0.4151 MIRKLLSQHLLFALGFLLSATIPFAHGESSTCLTVYKNGGAPAVFQSPKCPRWKLSDYDSPPQTTARCQSAMLQGRRNSQEDRTLCVLDVRIPFPGANGIKEVVVGIVAVFDGHNGAEASEMASKLLVEYFVLHTYFLLDATFSVISKTSTGTVLHKRDRDHVNLLHRWKEILGWQQQELHFERFQNTFSANFDDSFHLEILKEALLRAIHDIDANFSEEASRNNLHSGSTATVVLVADDKILVANIGDSKAFLCSEKFQSPKEAKDSLLKLYRQKELDSSLSVWDREKYRLASSHGLTHFAVKELTSDHHPDRDDERIRVETAGGQVQNWGGVPRINGQLAVTRAIGDVHFKSYGVISAPEVTDWQPLTANDSYLVAASDGVFEKMSVQDVCDILWEVHRFSNMRSECTPSSSYSLADFIVNTAVKKGSMDNVAAVVFPLESAKSSANLFRGSYIEKRDAGFSLFGLQEPASSSVNDIKSDLMQLEHPHLVDTKFKRILVEVKDGDFGCFYLSENLDEPVDSKPIAKKPEWEDYLYELPQPLDALHQHADSGGPVYLYNNQDFCFHLGPNVNKAKDQCINPEGFASFIGLLESIPLHDAGSSNESSDSMPDLRYVLKKSFGRGSYGEVWLAFHWNCNQDSNAAKMSKDGNNKNSSSTASNCQDGPSNYTQYILKRIMVERGSAVYLSGLREKYFGEIFLNASTCIENLFSDGKSNCVLETSQFGSENSFPNKFWLQRVSYEEGLNHIARYVESFESQANEIWLVFSYEGVSLTKLLYTVEDGFGTTEKERVEQVEHVQIIRPSKWWHWLKTTEEGQEEMRNLIWQLLLALKSCHDRNITHRDIKPENMVICFEDQETGRCLKGIPTKTNNFSTKMRIIDFGSGIDEFTLKHLYGSTGPSRAEQTYEYTAPEALLNATWYQGPASSTLKYDMWSVGVVMLELVLGTPNVFQINALTRALLDRHLEGWNEGVKELAYKLRSFMELCILIPGISGSSSKKYHPVNQVGVSPASWKCSEEFFSHQIKNRDPLKIGFSNIWALRLVRRLLHWDPEDRLSIDEALQHPYFQPTPRG* 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0261 1071 MobiDBLite consensus disorder prediction 644 663 - -
Apr8g0261 1071 ProSiteProfiles PPM-type phosphatase domain profile. 67 441 IPR001932 -
Apr8g0261 1071 SMART serkin_6 615 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0261 1071 Gene3D - 63 449 IPR036457 -
Apr8g0261 1071 CDD PP2Cc 74 441 IPR001932 -
Apr8g0261 1071 Gene3D Transferase(Phosphotransferase) domain 1 805 1066 - -
Apr8g0261 1071 SMART PP2C_4 59 439 IPR001932 -
Apr8g0261 1071 PANTHER ALPHABET, ISOFORM E-RELATED 21 603 - -
Apr8g0261 1071 Pfam Protein kinase domain 812 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0261 1071 SUPERFAMILY Protein kinase-like (PK-like) 614 1067 IPR011009 -
Apr8g0261 1071 Pfam Protein phosphatase 2C 201 434 IPR001932 -
Apr8g0261 1071 ProSitePatterns Serine/Threonine protein kinases active-site signature. 839 851 IPR008271 GO:0004672|GO:0006468
Apr8g0261 1071 ProSiteProfiles Protein kinase domain profile. 615 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0261 1071 PANTHER PROTEIN PHOSPHATASE 2C 50-RELATED 21 603 - -
Apr8g0261 1071 SUPERFAMILY PP2C-like 66 442 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0261 Apr-Chr8 2095597 2114373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0261 679 1069 PP2C-type Phosphatase Gene Family AT3G63340 65.063 2.07e-179 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSKL Apr8g0261 Pkinase 1.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0261 - - gmx:100781476 1923.29