Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0249 ATGGTGGGAAGTAAATTGGCTTATTATGGAAGTTTAACGGGTTGCGATTGTGTGGATGGATGTGGTGACGGATGCTTCTGTGCTATAAAAAATGGGGGCGACTTTCCTTATAGTCTCCAGGGGCTTCTCCTGAAAGGGAAGCCTTTGATTTCTGAATGTGGCCCTTCTTGTCCTTGTCCTCTGCATTGTCGGAATCGTCTTACACAGAGAGGGCTGAAAAATAGGTTCGAAGTGTTTAGGTCTCAGCTAAATAGTTGGGGAGTCAGGTCCTTGGACCTTATTCAAGCTGGTTCTTTTATCTGCGAGTATACTGGGGTTGTTTTGAATCAAATGCAAGAGCAAATCTTGATAATGAACAGTGACCAGGTGATATATCCTAATCGGTTCTCTGAAAGTTGGGCAGGATGGGGGGATTTGTCTCCGATATACCCAGATTATGTGCGTCCATCATATCCACCGGTACCTCTTCTCGATGTGTCAATTATGAAGAACTTGCTTGCTCTGTCAGCCTAG 513 0.4483 MVGSKLAYYGSLTGCDCVDGCGDGCFCAIKNGGDFPYSLQGLLLKGKPLISECGPSCPCPLHCRNRLTQRGLKNRFEVFRSQLNSWGVRSLDLIQAGSFICEYTGVVLNQMQEQILIMNSDQVIYPNRFSESWAGWGDLSPIYPDYVRPSYPPVPLLDVSIMKNLLALSA* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0249 170 Pfam Pre-SET motif 11 66 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Apr8g0249 170 PANTHER SU(VAR)3-9-LIKE PROTEIN-RELATED 8 165 - -
Apr8g0249 170 Gene3D SET domain 3 162 IPR046341 -
Apr8g0249 170 SUPERFAMILY SET domain 9 121 IPR046341 -
Apr8g0249 170 ProSiteProfiles Pre-SET domain profile. 13 71 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Apr8g0249 170 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 8 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0249 Apr-Chr8 1952606 1957244 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0249 14 121 Su(var)3-9 homologs AT5G04940 49.550 1.56e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0249 K11420 - aprc:113873874 351.288