Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0212 ATGACCATCTCACTGTTTATGTGTAGACTAAGACAACCCGTAGTAAACGTTCCTTGTAGTGGCAAAAAACTTAATGTGAGGCAAATTCAGAAAGAGAAGGTAGTGTTAGTGATGGGAGCCACAGGCACAGGAAAGTCAAGGCTCTCCGTTGACCTTGCAACATGTTTTCCATCAGAAATCATCAACTCCGACAAAATTCAAGTCTACCAAGGACTTGACATAGTCACAAACAAAATCTCCAAAGAAGACCAACGTGGCGTACCCCACCATTTACTAGGAACACAAAACCCCGACACTGAGTTCACAGTAAATGATTTCTGTGACACTTCATCATCAGCCATTCAATCAATCACTGCCCATGAACAGCTTCCAATCATCGTTGGTGGTTCCAATTCATATCTTGAGGCTTTGATCGACGATGATGATTACAAGTTCCGATCAAGGTACGATTTTTGCTGCCTCTGGGTGGACGTGTCAATGCCTGTTCTTTATTCCTATGTAGCAGAACGAGTTGATCAAATGTTTCACAGTGGAATGGTTGACGAGTTGAGACCCTTTTTCAATCCCAACGGGGATTATTCAAGAGGAATTAGAAGAGCCATTGGGGTCCCTGAATTTGATGAGTATTTTAGGAGGGAAGCGTTTGTGGGTGAGGAAACGAGGAAAAAGTTATTGGAAGAAGCACTTAGTGCAATAAAGTTGAATACTTGCAAGCTGGCTATGAAGCAATTAGGGAAGATTCATAGGCTGAAGAATGTTAAGAGATGGGAAATTCATCGCTTGGATGCCACAGCCGTGTTTCGAAAGCGTGGACAAGAATCAAATGAGGCTTGGAACAAGTTGGTGGCAGAACCCAGTGCTATGATTGTAGCTCGTTTTCTCTATAATTCGACCAATACCAACGTTGTTTCTGGTCTTAGAGTGCCAGCTTCCGAGGGTGTTATGGCTGCGGCAACATGCTAG 963 0.4341 MTISLFMCRLRQPVVNVPCSGKKLNVRQIQKEKVVLVMGATGTGKSRLSVDLATCFPSEIINSDKIQVYQGLDIVTNKISKEDQRGVPHHLLGTQNPDTEFTVNDFCDTSSSAIQSITAHEQLPIIVGGSNSYLEALIDDDDYKFRSRYDFCCLWVDVSMPVLYSYVAERVDQMFHSGMVDELRPFFNPNGDYSRGIRRAIGVPEFDEYFRREAFVGEETRKKLLEEALSAIKLNTCKLAMKQLGKIHRLKNVKRWEIHRLDATAVFRKRGQESNEAWNKLVAEPSAMIVARFLYNSTNTNVVSGLRVPASEGVMAAATC* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0212 320 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 25 300 IPR039657 -
Apr8g0212 320 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 141 IPR027417 -
Apr8g0212 320 Pfam IPP transferase 145 244 - -
Apr8g0212 320 Pfam IPP transferase 67 140 - -
Apr8g0212 320 Gene3D - 31 294 IPR027417 -
Apr8g0212 320 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 160 258 - -
Apr8g0212 320 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 25 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0212 Apr-Chr8 1703138 1704331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0212 147 300 C2H2 Transcription Factor Family AT2G27760 33.149 2.17e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0212 K10760 - gmx:100803964 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0212 8 1703138 1704331 Apr8g0212 8 1703138 1704331 ECH
Apr4g1088 4 9149004 9159690 Apr8g0212 8 1703138 1704331 PCT