Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0191 ATGAAGGAAAAGGTGGATTACCCTGTTACCGTCCTAGAGGACTATTTCAAAATGAAGGAAAAGGTGGATTCGCCTGTTACAGTTCTTGAGGACTATTTCAGGAGCTCAGATTCAGAATCAAGTTCTTCCAAAGAGCCCTCAGCTGATTCTGAGTCTCAAGACATTTCAAAACCTGCTTCTAGGTGGCATTCATTTCTTCAATTGTTGAGGAGCAGATCAAAGAAACAGATGGCCACATTGCACCCTCTCAAGCTCTCCAAAAGAATGAGCAGTAGCATGAGGGAAACCATTCTCCCAAGTTGTCTCCTAGAGGTAGCTGCTTCCCCTTGCAGGTCACCGTGGAAGATATTCACTCATCATGAGATACAAGTTGCAACCAATTATTTCAGCCAAGAAAATTTAATTGGGAAGGGTGGTTATGCTGAAGTTTACAAAGGGTGTTTGCCAAATCGCCAGCTAGTGGCAATTAAACGGCTAACAAGAGGAACAGCTGATGAAATCATCGGGGACTTCTTATCAGAACTTGGTGTAATGGCGCATGTGAACCATCCCAATACTGCTAAGCTTGTTGGTTATGGGGTGGATGGTGGAATGTTTCTAGTTCTTGAATTGTCTGAAAAAGGGAGCCTAGCTTCAGTGCTTTATGGTTCCAAGGAGAAACTACCTTGGTGTATTAGGCACAAAATCGCATTAGGAACAGCAAATGGTATATTATATCTTCATGAGGGTTGTCAAAGAAGAATTATCCATAGGGATATAAAAGCTGCTAATATCTTGCTCACGGAGGACTTTGAGCCTCAGATTTGTGATTTCGGGCTAGCAAAATGGCTGCCAGAAAATTGGACTCACCATACCGTTTCAAAATTTGAAGGAACTTTCGGCTACCTTGCTCCTGAATACTTGCTGCATGGCATAGTAGATGAGAAAACGGACGTATTTGCCTTTGGGGTGCTACTATTAGAATTAGCAAAACCATTGCTGAAAAAGAATGATATTATGGAGCTGATTGATCCTTCACTAGCAGGTGAATTCGAGCCTAGGCAGGTGAATCTAATGCTTTTGGCAGCTTCTTTATGCATTCAGCAGTCCTCAATTCGTCGACCCTCTATCAAACAGGTTCTACAGCTTCTGAATGGCAACCTTAGCTGTTTCAAGGGCATCAAGAAAACTCGATTCCCATTCTTCCGAAAAGTCTTCCGCGAAGAACTTCATGATTCTGAATAG 1224 0.4257 MKEKVDYPVTVLEDYFKMKEKVDSPVTVLEDYFRSSDSESSSSKEPSADSESQDISKPASRWHSFLQLLRSRSKKQMATLHPLKLSKRMSSSMRETILPSCLLEVAASPCRSPWKIFTHHEIQVATNYFSQENLIGKGGYAEVYKGCLPNRQLVAIKRLTRGTADEIIGDFLSELGVMAHVNHPNTAKLVGYGVDGGMFLVLELSEKGSLASVLYGSKEKLPWCIRHKIALGTANGILYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLAKWLPENWTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLLLELAKPLLKKNDIMELIDPSLAGEFEPRQVNLMLLAASLCIQQSSIRRPSIKQVLQLLNGNLSCFKGIKKTRFPFFRKVFREELHDSE* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0191 407 Gene3D Phosphorylase Kinase; domain 1 105 203 - -
Apr8g0191 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Apr8g0191 407 Gene3D Transferase(Phosphotransferase) domain 1 206 388 - -
Apr8g0191 407 Pfam Protein tyrosine and serine/threonine kinase 132 376 IPR001245 GO:0004672|GO:0006468
Apr8g0191 407 PANTHER PROTEIN KINASE FAMILY PROTEIN 18 405 - -
Apr8g0191 407 PANTHER OS08G0249100 PROTEIN 18 405 - -
Apr8g0191 407 ProSitePatterns Protein kinases ATP-binding region signature. 135 157 IPR017441 GO:0005524
Apr8g0191 407 MobiDBLite consensus disorder prediction 35 58 - -
Apr8g0191 407 SMART serkin_6 129 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0191 407 ProSiteProfiles Protein kinase domain profile. 129 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0191 407 SUPERFAMILY Protein kinase-like (PK-like) 114 393 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0191 Apr-Chr8 1542698 1546185 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0191 117 379 Receptor kinase-like Gene Family AT1G53420 38.542 1.92e-60 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Apr8g0191 PK_Tyr_Ser-Thr 1.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0191 - - gmx:100780587 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0191 8 1542698 1546185 Apr4g0757 4 6173486 6176626 ECH
Apr8g0191 8 1542698 1546185 Apr8g1475 8 23639163 23641701 ECH
Apr8g0191 8 1542698 1546185 Apr8g0191 8 1542698 1546185 ECH
Apr8g0191 8 1542698 1546185 Apr4g1111 4 9396713 9399875 ECH
Apr1g1693 1 26611910 26615660 Apr8g0191 8 1542698 1546185 ECH
Apr4g1111 4 9396713 9399875 Apr8g0191 8 1542698 1546185 PCT