Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0184 ATGGGGTCGAAGCCGTGGCTTTACCCTGCTCCTACCTATCGAACTTTAGAAACCACTTACTGGGACACCGATGAAGACGCACCTGGCCCTCGCTGTGGCCACACTCTTACTGCCGTTGCCGCCACCAAGTCGCATGGTCCTCGCTTAATACTCTTCGGCGGCGCCACCGCCATTGAAGGGGGATCTTCATCCGCTCCCGGCATTCGACTAGCGGGGGTGACGAATTCCGTCCATTCCTATGAGATTCAAACTAGAAAATGGACTAGTCTTAAACCTGCCGGAGAGCCACCCTCTCCTCGGGCTGCACATGCTGCTGCTGCAGTTGGCACCATGGTTGTTTTTCAGGGTGGGATAGGTCCTGCTGGACATTCTACTGATGATCTCTATGTGCTTGACTTGACCAATGATAAATACAAATGGCACAGAGTCGTTGTACAAGGGCAAGGACCCGGACCTCGCTATGGCCATGTAATGGACTTGGTTGCTCAGAGATATCTAGTAACCGTCAGCGGAAATGATGGGAAAAGAGTTGTATCTGATGCTTGGGCTTTGGATACTGCTCAAAAACCTTATGTGTGGCAGAAGCTGAACCCAGAAGGTGACAGACCTTCTGCTAGAATGTATGCCACTGCTAGTGCCCGTTCAGATGGAATGTTTTTACTGTGTGGTGGAAGAGACTCTTCTGGAGCTCCGCTATCAGATGCCTATGGATTGCTCATGCACAGGAATGGCCAGTGGGAATGGACCCTTGCACCTGGAGTTTCCCCTTCACCAAGGTATCAACATGCTGCGGTTTTTGTTGGTGCACGATTACATGTTACTGGAGGTGTTCTCAGGGGTGGACGGGCTGTGGAAGGTGAAGCATCCATTGCAGTATTGGACACTGCTGCTGGGGTTTGGTTGGACAGAAATGGAATTGTGTCCTCCTCACGCCCAAACAAAGGTCATGATTATGACCCTTCTTTGGAGCTCATGCGTCGTTGTCGGCATGCAGCAGCAGCTGTTGGTGTTCATATATTTATCTACGGCGGTCTGAGAGGAGCACCAAATATGGATGGTGGACCAGATTCTCCCTCATCTGGTGGCTCAGGCATGGACAAAAATTCCTTGGAGAAACTGAGGGAAGCATCAGCTGCTGAAGCTGAGGTAGCAAGTGCTGTCTGGCAAGCTGTGCAGGCTATATCCAGTAGTCCTGCTGAAGAAACATCTGTGTCAGATGACAACTCACAAGCTGCAGAAACAGTTTCAGATGGAAGTGACACAGAGGGAGATGTTCGCCTTCATCCTAGGGCTGTTGTGGTTGCTAAAGAGGCTGTGGGTAACCTAGGTGGAATGGTGAGACAATTATCGCTAGATCAATTTGAAAATGAAAGCAGACGTATGGTTCCAGTAAATAATGATTTGCCATATCCTACAAAAAAGTTCACCAGGCAGAAATCCCCTCAGGGTTTACATAAAAAGATAATTTCAACTTTGCTTAGGCCTCGCAACTGGAAAGCTCCTGCAAACAGGCGTTTCTTCTTGGATTCTTATGAAGTGGGTGAGCTTTGCTATGCAGCTGAGCAACTATTTATGCAAGAACCAACCGTTCTTCAGCTGAAAGCTCCTGTCAAAGTATTTGGTGATCTTCATGGTCAGTTTGGTGATTTGATGCGGCTGTTTGATGAATATGGATTTCCTTCTACTGCAGGAGACATTACGTATATTGACTACCTGTTTTTGGGAGATTATGTTGATCGAGGACAGCACAGCTTGGAAACCATTACCTTGCTACTTGCTCTTAAGATTGAATATCCTGAGAATGTTCACTTGATACGTGGAAACCATGAAGCTGCTGACATAAATGCACTATTTGGTTTTCGTATAGAGTGCATTGAAAGAATGGGTGAAAGTGATGGAATATGGGCATGGACACGATTCAATCAACTTTTTAACTATCTTCCGCTGGCTGCTCTTATTGAAAAGAAAATCATCTGCATGCATGGTGGCATTGGAAGATCCATCCACTCAGTAGAACAGATAGAGAAGCTTGAAAGGCCGATAACAATGGATGCCGGATCTATTATTTTAATGGATCTTTTATGGTCTGATCCCACAGAGAATGATAGTGTAGAGGGTTTGAGACCAAATGCTAGAGGGCCAGGGCTTGTCACTTTTGGGCCTGACCGTGTCACTGAATTTTGTAAGAAAAATAAATTACAGCTCATTATAAGGGCCCATGAATGTGTCATGGATGGTTTTGAACGATTTGCCCAGGGACAATTAATCACTCTTTTTTCTGCTACTAACTATTGTGGAACTGCAAACAATGCGGGAGCTATACTGGTTGTTGGTAGGGGTTTGGTTGTGGTTCCAAAATTAATTCATCCCTTGCCACCTCCCCTTCAGTCTCCTGAGACATCTCCTGAGCGTGTCATGGATGAGACATGGATGCAGGAGCTTAATATTCAGAGGCCACCAACTCCTACCCGGGGTCGACCACAGCCTGACCTTGACCGTGGCTCACTAGCATATATATGA 2520 0.4687 MGSKPWLYPAPTYRTLETTYWDTDEDAPGPRCGHTLTAVAATKSHGPRLILFGGATAIEGGSSSAPGIRLAGVTNSVHSYEIQTRKWTSLKPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKYKWHRVVVQGQGPGPRYGHVMDLVAQRYLVTVSGNDGKRVVSDAWALDTAQKPYVWQKLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGAPLSDAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLRGGRAVEGEASIAVLDTAAGVWLDRNGIVSSSRPNKGHDYDPSLELMRRCRHAAAAVGVHIFIYGGLRGAPNMDGGPDSPSSGGSGMDKNSLEKLREASAAEAEVASAVWQAVQAISSSPAEETSVSDDNSQAAETVSDGSDTEGDVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMVPVNNDLPYPTKKFTRQKSPQGLHKKIISTLLRPRNWKAPANRRFFLDSYEVGELCYAAEQLFMQEPTVLQLKAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRIECIERMGESDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPPLQSPETSPERVMDETWMQELNIQRPPTPTRGRPQPDLDRGSLAYI* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0184 839 Pfam Kelch motif 97 134 - -
Apr8g0184 839 MobiDBLite consensus disorder prediction 398 426 - -
Apr8g0184 839 SUPERFAMILY Metallo-dependent phosphatases 489 800 IPR029052 -
Apr8g0184 839 Pfam Calcineurin-like phosphoesterase 536 743 IPR004843 GO:0016787
Apr8g0184 839 ProSitePatterns Serine/threonine specific protein phosphatases signature. 605 610 IPR006186 GO:0016787
Apr8g0184 839 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 351 839 - -
Apr8g0184 839 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 348 - -
Apr8g0184 839 Gene3D - 195 409 IPR015915 GO:0005515
Apr8g0184 839 MobiDBLite consensus disorder prediction 398 417 - -
Apr8g0184 839 MobiDBLite consensus disorder prediction 814 839 - -
Apr8g0184 839 SMART pp2a_7 508 794 IPR006186 GO:0016787
Apr8g0184 839 CDD MPP_Bsu1_C 488 790 IPR041758 -
Apr8g0184 839 PIRSF STPPP_BSU1 349 839 IPR012391 GO:0004721|GO:0009742
Apr8g0184 839 PIRSF STPPP_BSU1 1 354 IPR012391 GO:0004721|GO:0009742
Apr8g0184 839 Gene3D - 12 194 IPR015915 GO:0005515
Apr8g0184 839 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 351 839 - -
Apr8g0184 839 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 348 - -
Apr8g0184 839 MobiDBLite consensus disorder prediction 348 376 - -
Apr8g0184 839 SUPERFAMILY Kelch motif 74 347 IPR015915 GO:0005515
Apr8g0184 839 Gene3D - 469 810 IPR029052 -
Apr8g0184 839 PRINTS Serine/threonine phosphatase family signature 536 563 IPR006186 GO:0016787
Apr8g0184 839 PRINTS Serine/threonine phosphatase family signature 571 598 IPR006186 GO:0016787
Apr8g0184 839 PRINTS Serine/threonine phosphatase family signature 604 628 IPR006186 GO:0016787
Apr8g0184 839 PRINTS Serine/threonine phosphatase family signature 642 668 IPR006186 GO:0016787
Apr8g0184 839 PRINTS Serine/threonine phosphatase family signature 672 699 IPR006186 GO:0016787
Apr8g0184 839 PRINTS Serine/threonine phosphatase family signature 732 752 IPR006186 GO:0016787
Apr8g0184 839 PRINTS Serine/threonine phosphatase family signature 754 770 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0184 Apr-Chr8 1468201 1479383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0184 537 735 Calmodulin-binding Proteins AT5G63870 32.609 2.91e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0184 K01090 - gmx:100805538 1575.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0184 8 1468201 1479383 Apr8g0184 8 1468201 1479383 ECH