Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0181 ATGACAGGGATCGTAATGGTGACTAAGGGTGGTGGTTGCGGTGGCGGTGGCAAGAGGAGCAGAGTCTCTGGAACCACCGAGGAAGAACAACACAACCAACTCTCCCTCGTCGCTCTTCTCTTGGCGGCTATAAGAAAATCAATGGTTTCTTGCAGGGTCGACCAACCCGACGATGTAATCTCCACCGTCCATCACATGGAGATCGGATGGCCTACCAACGTCCAACACATCACTCATGTCACTTTCGATCGCTTCAACGGCTTTCTCGGTCTCCCCGTTGAGTTCCAAGTCGAGATCCCAGCTCCCGTTCCCAGTGCCAGTGTAAGTGTGTTTGGTGTCTCAGCAGAATCTATGCAGTGCTCTTATGATTCTAAAGGAAACAGTGTTCCCACTATTCTCTTGCTAATGCAGGACCGTTTATACTCACAGGGAGGCTTAAAGGCTGAAGGTATATTTCGTATAAACCCAGAAAATAGTCAAGAGGAGCATGTGAGGGACCAGTTGAATAGAGGCATTGTGCCAGATGACATTGATGTTCACTGCTTAGCGGGACTAATCAAAGCTTGGTTCCGAGAGCTTCCCTCAGGAGTGCTTGATGGACTTTCCCCTGAGCAAGTTCTTCAGTGCAATACAGAAGAAGATTCTGTTGAGCTTGTGAGGCAGCTAAAGCCAACTGAATCTGCCTTACTCAACTGGGCTATTGGTCTTATGGCCGATGTTGTGGAAGAGGAAGAGTTTAACAAAATGAATGCAAGAAATATTGCAATGGTTTTTGCTCCAAACATGACTCAGATGTCTGATCCTCTAACTGCCCTGATGCATGCGGTGCAAGTGATGAACTTACTCAAGACACTGATAATGAAGACACTTAGAGAACGTGAAGAAACAGCTACAGGTGGGTATTCTCCTATGTCATTTCACTCGTCAGATCGCCAATCTGAAGATGAATATGACAGTCAGCGAGAAATGGACACCAGCGGTGAATTGAGAGGAACCAAATCAGATTATGATGATCATGCTCACTACAGCCATAGTAGTGAAGAGGAAGAAGGGGAGGCTGAATCTTTAAGTGAGATAGAGGAATGCTTCTTGAAACAGTTGGATGAGAACACCAAATCATTCTCAGAAGTACCTGCAGGTAATTTGCAAGAGTACGTTAGCTCCAGAAGTTGCTCTGGCTATGTCATGGAACCTGCTACATCAGTTTCCGACAGCAAAGCAGGGAATTCCTGCTCGAGGACAACACTGACTAGTTTGAGCTCAAATGTTGACACAAGTAGTCCATCAATAGGATATGCTGGCACCAATGATATGGATATGATGGATAAATTTACGGATTCTATTTCACCGGTGCCACTTCTTGCTTCTAGTTAA 1374 0.4578 MTGIVMVTKGGGCGGGGKRSRVSGTTEEEQHNQLSLVALLLAAIRKSMVSCRVDQPDDVISTVHHMEIGWPTNVQHITHVTFDRFNGFLGLPVEFQVEIPAPVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQDRLYSQGGLKAEGIFRINPENSQEEHVRDQLNRGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLQCNTEEDSVELVRQLKPTESALLNWAIGLMADVVEEEEFNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREETATGGYSPMSFHSSDRQSEDEYDSQREMDTSGELRGTKSDYDDHAHYSHSSEEEEGEAESLSEIEECFLKQLDENTKSFSEVPAGNLQEYVSSRSCSGYVMEPATSVSDSKAGNSCSRTTLTSLSSNVDTSSPSIGYAGTNDMDMMDKFTDSISPVPLLASS* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0181 457 MobiDBLite consensus disorder prediction 402 433 - -
Apr8g0181 457 SUPERFAMILY GTPase activation domain, GAP 109 287 IPR008936 GO:0007165
Apr8g0181 457 MobiDBLite consensus disorder prediction 402 436 - -
Apr8g0181 457 Pfam RhoGAP domain 130 264 IPR000198 GO:0007165
Apr8g0181 457 Gene3D Rho GTPase activation protein 100 294 IPR008936 GO:0007165
Apr8g0181 457 SMART RhoGAP_3 127 290 IPR000198 GO:0007165
Apr8g0181 457 PANTHER MKIAA1688 PROTEIN 1 422 IPR044785 GO:0005096
Apr8g0181 457 ProSiteProfiles CRIB domain profile. 68 81 IPR000095 -
Apr8g0181 457 PANTHER RHO GTPASE ACTIVATION PROTEIN-RELATED 1 422 - -
Apr8g0181 457 ProSiteProfiles Rho GTPase-activating proteins domain profile. 113 294 IPR000198 GO:0007165
Apr8g0181 457 MobiDBLite consensus disorder prediction 296 357 - -
Apr8g0181 457 Pfam P21-Rho-binding domain 67 96 IPR000095 -
Apr8g0181 457 SMART PBD_5 68 102 IPR000095 -
Apr8g0181 457 MobiDBLite consensus disorder prediction 309 350 - -
Apr8g0181 457 CDD RhoGAP 130 286 - -
Apr8g0181 457 Gene3D CRIB domain 63 99 IPR036936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0181 Apr-Chr8 1450682 1452724 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0181 - - gmx:100807134 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0181 8 1450682 1452724 Apr8g0181 8 1450682 1452724 ECH
Apr4g0437 4 3713068 3716070 Apr8g0181 8 1450682 1452724 PCT