Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0150 ATGGTCGAAACCAGACGCAGCAGCTCCTCTTCTTCCAAGCGTTCTCTCTCTTCTCCTTCTCCACCTAACACCAAACGATCCAAGGTGTCGGAGGATTCCTCGTCCACTACGCTTCCCTCCGCGGGAATTATCTCTCCGGTCAACGAATCTGGACCCGGTAATGAATCTGGAGAACCGGAGCTACGACCTTCTGATCTGCCAGATACGGCTTCGTTGAAGGCTGTGGATGCTTGTGATGCGATGTCACCTGATAAATCTCTTTCTGTGCCCCTTGAAGGCGAGGCCTTGGAGTCCCCACAGTGTTTAGGTGAAACAGCGGAGAAATCCATGGTGGCTGGCGCGGCGGCCGCACCGTCGTCTGGTCGGGTGAAGAAACGTCCTACAAAATTTAGCCCCAAGACTGCGTGGGGGAAGCTCCTTTCTCAGTGTTCTCAGAATCCTCACGTGGCCATGAGTGATCCTATCTTCACTGTTGGTCAAGGTCGTCATTGTAATTTATGGCTCAAAGATCCCACTGTTGGTAATATTTTGTGCAAGTTGAGTCACATAGAGCGTGGAGGTTCATCTGTTGCATTACTCGAAATCACAGGAGGTAAAGGTTCTATTCAAGTTAATGGCAAGACTTATAGGAAGAATGCTCGTCTGATTTTAAGCGGAGGTGACGAGGTGGTCTTTGGTTCTTCTGGCAAGCATGCTTATATCTTTCAGCAGCTGACGAATGACAATATTAGTGCTGCTGGTATACCTTCTGTTAGTATTTTAGAAGCCCAGAGTGCTCCGATAAATAGAACGCAAGTTGAAGCTAGATCTGGTGACACCTCGGCTGTTGCTGGAGCATCAATACTGGCCTCTTTATCTAATCTTCATAAAGATTTATCTCTCCTTTCACCCCCTGCCAACACTGGTGATAATGTGGAACAGAACACTGACATTCCATCATTACCTTCTGGCATCACAGATGATATTCCAGAGAATGAAATGAAGGATACCACCAATAATGATGAACCAGCTGGAGTTTTCTCTGCTGAGAAAACTGTTCTTGCATCTGCTAACAATGTTAATGAAAGTACTAGCATTGACCCCGTAGAAACCAACCCCAATGTGGATGCAGATGTTGGGAAGATGCCTGCTGCTGCATATGAATTGAGGCCATTACTGCGCATGCTTGCTGGCTCATGTCCTGAACTTGATCTAAGTTGTGGCATTTCCAAGATATTGGAAGAGCGGGAATTAAGAGAACTCCTTAAAGATGTTGATACCCCAACAATATTGGCATCAACCAGACGGGAAGCATTTAAGGACAGTTTACAAAAAAGAATTCTCAAATCTGAGAATATTGATGTCTCATTTGAAACTTTCCCATATTATCTAAGTGATACAACGAAGAACGTTTTGATTGTTTCTGCATTTATTCATTTGAAGTGCAATGGTTTTGGAAAATATGCTTCAGACCTCCCATCAGTGGCCCCACGGATATTGTTATCTGGTCCTACAGGTTCGGAAATATATCAGGAGACTTTGTCCAAAGCACTTGCGAAGCATTTTGATGCTAGGCTACTAATTGTGGATTCTCTTTCGTTGCCTGGTGGAGCACCGTCAAAGGAGGTTGATTCTGCTAAAGAAAGTTCTAGGCCTGAAAGACCATCTGTGTTTGCCAAGAGAAGTGCCCAGACTGCCACATTACAGCATAAGAAACCAACTTCTAGTGTGGATGCTGAAATAATAGGTGGATCCACGTTAAGTTCTCAGGCTATGCTAAAGCAAGAGGTTTCTACTGCATCATCAAAAGGAACAACTTTTAAAACAGGTGATCGAGTAAAATTTGTTGGTAACTTTCCTTCTGCTGTCTCCCCGCTACCAAATTATCCTTCACGGGGACCAAGCTATGGCTCTCGGGGCAAAGTTCTCCTTCCTTTTGAAGATAACGGGTCTTCAAAAATTGGGGTTAGGTTTGATAAATCAATTCCAGATGGCAATGATCTTGGAGGCATTTGTGAAGATGATCGTGGGTTCTTTTGTTCTGCAAATCACTTATTACGTGTTGATGGTTCTGGAGGGGATGACATAGATAAAGTTGCAATAAATGAAATCTTTGAGGTTACCTCTAATCAGAGTAAAAGTGGTCCACTAGTGTTGTTCATTAAAGATATAGAGAAGGCGATGGTTGGGAACTATGAAGTTTTGAAAAGTAAATTTGAAAACTTGCCACAGAATGTTGTGGTAATTGGCTCTCATACTCTGCTGGACAATCGTAAGGAGAAGACCCAACCTGGTGGCCTTCTGTTTACCAAGTTTGGGAGCAATCAGACAGCACTACTTGATCTTGCTTTTCCGGATAACTTTAGTAGACTGCATGATAGGAGCAAAGAAACCCCTAAAGTAATGAAGCAACTTAGTCGCCTTTTCCCGAACAAAGTGACAATACAGCTGCCTCAGGATGAGGCTTTACTTTCTGATTGGAAGCAGCAATTAGAACATGATATTGAAACTATGAAAGCTCAGTCGAATATTGTCAGCATTCGCTCAGTTCTCAACAGAATTGGATTGGATTGCCCTGACATTGAGATTCTTTCCATCAAAGACCAAACTCTAACAGCTGAAAGTGTGGAGAAGATCATTGGATGGGCTATTAGTTACCATTTTATGCATTCATCTGAAGCTTCTATCAAAGATTCTAAGCTTGTGATATCTGCTGAAAGCATTACATATGGGATTAACATTCTACAGGGCATTCAAAATGAGAACAAGAACTTGAAAAAATCACTGAAGGATGTGGTTACTGAGAATGAATTTGAGAAAAAACTGCTGGGTGATGTTATTCCACCAACTGATATTGGGGTCACATTTGACGATATTGGAGCTTTAGAAAATGTTAAGGACACATTAAAGGAATTGGTCATGCTTCCTCTTCAGAGGCCTGAATTGTTTTGCAAAGGACAGTTGACAAAGCCTTGCAAGGGAATATTGCTTTTTGGCCCCCCTGGCACTGGAAAAACCATGCTTGCAAAAGCAGTAGCAACTGAAGCTGGAGCAAATTTCATTAACATATCAATGTCCAGCATTACTTCAAAGTGGTTTGGTGAAGGAGAAAAATATGTCAAGGCGGTCTTTTCTCTGGCCAGCAAAATTGCTCCAAGTGTTATTTTTGTTGACGAGGTGGATAGTATGTTAGGGAGACGAGAAAACCCTAGTGAGCATGAGGCTATGCGTAAAATGAAGAATGAGTTTATGGTTAATTGGGATGGTCTGCGCACAAAAGATAAAGAGCGTGTACTTGTTCTTGCTGCTACAAACAGGCCTTTTGATCTTGATGAGGCTGTTATAAGGAGGCTGCCTCGGAGATTGATGGTTAATTTGCCAGATGCTCCAAATAGAGAAAAAATTCTGAGAGTCATTTTGGCGAAAGAAGATTTGGCACCTGATGTTGATTTTGAAGCAATAGCTAATATGACTGACGGATATTCAGGGAGTGACCTTAAGAATCTGTGTGTAACAGCAGCTCACTGCCCAATACGAGAGATCTTGGAGAAGGAAAAGAGGGAGAGAAGCTTAGCATTGTCTGAGAACAAACCTTTACCTGGATTGTGTAGCAGTGCCGACATTCGTCCTTTAAAGATGGATGATTTTAAATATGCACATGAGCAGGTGTGTGCAAGCGTGTCATCAGAGTCAACAAATATGAATGAGTTACTCCAATGGAATGACCTCTACGGAGAAGGGGGATCAAGAAAAATGAGATCATTGAGCTATTTCATGTAA 3759 0.4264 MVETRRSSSSSSKRSLSSPSPPNTKRSKVSEDSSSTTLPSAGIISPVNESGPGNESGEPELRPSDLPDTASLKAVDACDAMSPDKSLSVPLEGEALESPQCLGETAEKSMVAGAAAAPSSGRVKKRPTKFSPKTAWGKLLSQCSQNPHVAMSDPIFTVGQGRHCNLWLKDPTVGNILCKLSHIERGGSSVALLEITGGKGSIQVNGKTYRKNARLILSGGDEVVFGSSGKHAYIFQQLTNDNISAAGIPSVSILEAQSAPINRTQVEARSGDTSAVAGASILASLSNLHKDLSLLSPPANTGDNVEQNTDIPSLPSGITDDIPENEMKDTTNNDEPAGVFSAEKTVLASANNVNESTSIDPVETNPNVDADVGKMPAAAYELRPLLRMLAGSCPELDLSCGISKILEERELRELLKDVDTPTILASTRREAFKDSLQKRILKSENIDVSFETFPYYLSDTTKNVLIVSAFIHLKCNGFGKYASDLPSVAPRILLSGPTGSEIYQETLSKALAKHFDARLLIVDSLSLPGGAPSKEVDSAKESSRPERPSVFAKRSAQTATLQHKKPTSSVDAEIIGGSTLSSQAMLKQEVSTASSKGTTFKTGDRVKFVGNFPSAVSPLPNYPSRGPSYGSRGKVLLPFEDNGSSKIGVRFDKSIPDGNDLGGICEDDRGFFCSANHLLRVDGSGGDDIDKVAINEIFEVTSNQSKSGPLVLFIKDIEKAMVGNYEVLKSKFENLPQNVVVIGSHTLLDNRKEKTQPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKVMKQLSRLFPNKVTIQLPQDEALLSDWKQQLEHDIETMKAQSNIVSIRSVLNRIGLDCPDIEILSIKDQTLTAESVEKIIGWAISYHFMHSSEASIKDSKLVISAESITYGINILQGIQNENKNLKKSLKDVVTENEFEKKLLGDVIPPTDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPSEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNREKILRVILAKEDLAPDVDFEAIANMTDGYSGSDLKNLCVTAAHCPIREILEKEKRERSLALSENKPLPGLCSSADIRPLKMDDFKYAHEQVCASVSSESTNMNELLQWNDLYGEGGSRKMRSLSYFM* 1253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0150 1252 Pfam ATPase family associated with various cellular activities (AAA) 988 1117 IPR003959 GO:0005524|GO:0016887
Apr8g0150 1252 SMART AAA_5 984 1121 IPR003593 -
Apr8g0150 1252 MobiDBLite consensus disorder prediction 1 52 - -
Apr8g0150 1252 CDD AAA 986 1119 - -
Apr8g0150 1252 MobiDBLite consensus disorder prediction 553 570 - -
Apr8g0150 1252 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 947 1226 IPR027417 -
Apr8g0150 1252 MobiDBLite consensus disorder prediction 531 570 - -
Apr8g0150 1252 Pfam AAA+ lid domain 1141 1176 IPR041569 -
Apr8g0150 1252 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 1252 - -
Apr8g0150 1252 SUPERFAMILY SMAD/FHA domain 136 231 IPR008984 GO:0005515
Apr8g0150 1252 Gene3D - 578 686 - -
Apr8g0150 1252 ProSitePatterns AAA-protein family signature. 1091 1110 IPR003960 GO:0005524|GO:0016887
Apr8g0150 1252 MobiDBLite consensus disorder prediction 1 68 - -
Apr8g0150 1252 Coils Coil 908 928 - -
Apr8g0150 1252 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 1252 - -
Apr8g0150 1252 CDD FHA 161 236 IPR000253 GO:0005515
Apr8g0150 1252 MobiDBLite consensus disorder prediction 298 315 - -
Apr8g0150 1252 Gene3D - 946 1226 IPR027417 -
Apr8g0150 1252 Gene3D - 135 245 - -
Apr8g0150 1252 MobiDBLite consensus disorder prediction 298 335 - -
Apr8g0150 1252 Gene3D - 1120 1214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0150 Apr-Chr8 1120526 1148516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0150 947 1191 Calmodulin-binding Proteins AT3G56690 39.286 1.57e-40 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0150 - - gmx:100801477 2139.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0150 8 1120526 1148516 Apr8g0150 8 1120526 1148516 ECH