Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0147 ATGTCTTCTGAAGCTTTTACATGGATCACGTACCTCTCATGTTCACCCTCAAGGGACACATTTCTCTCGACTTCAAGTCTACCTCAGTGGCTGAGATTCATTTTCCTCTCTCCATGTCCTCAGAGAGCTATTTTCTCTGCTGTTGACATCCTACTCCTGTTGACCCTCTTTGTGTTTGCTGTTATAAAGCTCTATTCTAGGTTCACTTCCAATGGCAACCCCAACTCAGAGCTCAACAAGCCCCTTATCAGAAACAACGCGGCTTCTGACAGAACAACCTTATGGTTTAAACTAACTCTAATTGTATCAGCTGTTCTGACAATATTGTACACTGTCGCTTGCATTCTGTTATTTAGCAGTTCCACCAAAGTTCCATGGAAGCAAATTGATGGACTCTTCTGGTTAGTTCAGGCCGTAACACAATTAGTGCTTGCAATCCTAATCATCCATGAGAAAAGATTTGAAGCTGTTGTTCATCCTCTGTCGCTTAGAATATATTGGATTGCAAGTTTCATTATCGTTTCTTTGTTCACAGCTTCTGGGGTTATACGTTTGGTATCTGTGGAATTGGAAGACGGGATTAACTTCAGCTTTATGGTTGATGATATAGTCTCCTTCATTTCTCTTCCTCTATCACTGTTTCTACTTTGTGTTGCTGTTAAAGGGTCCACCGGGATCGAGTCCAGAGAAGAAACACAATCGCTTATCGATGATGAAACCAAACTATATGACAAATCCAATGTTACTGGCTTTGCTTCAGCTTCTGCAGTATCCAAGGCCTTTTGGATATGGATAAACCCCTTATTGAGTAAAGGTTATAAGTCACCGCTGAAGATTGATGAAATTCCTTCACTTTCACCACAGCATAGAGCAGAGAGGATGTCAGTTATCTTTGAATCGAAGTGGCCTAAATCAGATGAGAGGTCGAAGCACCCGGTTCGAACCACGTTGGTTCGGTGTTTCTGGAAGGAGATAGCCTTCACTGCTTTCCTTGCTGTTGTTAGGCTATGTGTCATGTTTGTAGGGCCAGTTCTCATTCAAAGTTTTGTTGATTTCACATCAGGGAAGGGTAGCTCTCCATATGAAGGTTACTACCTCGTGTTGGTTCTATTGTGTGCCAAATTTGTAGAAGTTTTGACCACTCACCATTTCAACTTCAACTCTCAGAAGCTTGGGATGCTTATCAGATGCACTCTTATCACTTCCTTGTACAAGAAGGGGTTGAGGCTATCGTGTTCCGCTAGGCAGGATCATGGGGTTGGTCCCATTGTGAATTACATGGCTGTGGATACTCAGCAATTATCTGATATGATGCTTCAGTTACATGCTGTGTGGATGATGCCATTTCAAGTTGGTATTGGCTTGTTTTTGCTTTACAATTGTCTAGGTGCTTCAGTACTCACGGCTTTGGTTGGACTTCTTGGTGTTCTTGCCTTTGTTGTGGTGGCTACTAAGAGAAACAAGCGTTTCCAGTTTAATGCAATGATGAACCGGGACTCAAGAATGAAAGCAGTTAATGAGATGCTTAACTACATGCGTGTCATCAAGTTCCAAGCATGGGAAGAGCATTTCAATGAGAGAATTTCGGGTTTCCGTAAGTCAGAGTTTGACTGGCTTTCCAAGTTTTTGTACTCAATCTGCAGCAATATTATTGTGCTGTGGAGCACGCCAATGTTGATATCAACTCTCACCTTTGGTACCGCAATTTTTCTTGGAGTTCCACTTGATGCAGGCACGGTTTTCACCACAACAACTGTGTTTAAGATCCTGCAGGAACCTATTAGGACCTTTCCTCAGTCTATGATATCACTTTCACAAGCATTGGTGTCACTTGGGAGGTTAGATAGGTACATGTCTAGCAGGGAATTGTTAAATGATTCGGTTGAGAGAGAGGAAGGGTGTGATGGACACACTGCTGTGGAGGTCACTGATGGGACTTTTAGCTGGGATGATGATGGCCTAGTGCAAGACTTGAAAAACATTAATTTGGAGATTAATAAAGGGGAGCTTACAGCTATTGTTGGGACTGTGGGGTCTGGAAAATCTTCTCTCCTTGCATCAATTCTTGGTGAAATGCACAAAATTTCGGGAAAGATTAAAGTTAGTGGGAGTACTGCTTATGTTGCACAAACATCTTGGATTCAGAATGGGACCATAGAAGAAAACATTCTCTTTGATTTACCAATGAATAGACAGAAGTACAATGAAGTTGTGAGGGTTTGTTGCTTGGAGAAAGACTTGGAAATGATGGAGCATGGGGATCAGACAGAGATTGGAGAGCGTGGCATCAACCTTAGTGGGGGTCAGAAGCAGCGTATACAACTTGCCAGGGCTGTATATCAAGACTCTGATATATATCTTCTTGATGATGTCTTCAGTGCTGTTGATGCACATACTGGCACTGAAATATTCAAGGAATGCGTGAGAGGGTCTCTAAAAGGCAAGACCGTTATTCTTGTAACACATCAAGTAGATTTCCTACACAATGTGGATCTTATAATGGTGATGAGGGAGGGAACAATAGTCCAATCAGGGAAGTACAATGATCTACTTGCTTCTGGAATGGATTTCAGTGCACTTGTAGCAGCACACGAGACCTCTATGGAACTAGTAGAGCAAGGTGCGGGCATGCCTGGGGAAAATTTGAACAAACCAATGAAATCTCCAAGGGCAGCTTCTAACAACAAAGAAGCAAATGGTGAAAGCAATTCACTTGAGCAGCCAAAGTCTGGCAAGGAAGGTTCTAAACTCATCAAAGAAGAGGAGAGAGAAACTGGGAAAGTTAGCTTCCATATCTATAAACTCTACTGCACTGAGGCTTTTGGTTGGTGGGGGATTATAGGAGTAATCTTTCTTTCTGTGTTGTGGCAAGCAGCTATGATGGCAAGTGATTATTGGCTGGCATATGAAACATCTGAAGAGCGTGCTCAGCTTTTTAATCCTTCCTTGTTTATTTCCATCTATGCAATTATTGCTGCAGTTTCAGTTATTTTGATTGTGCTACGATCCTACTGGGTTACAATCTTGGGGTTAAAGACAGCACAGATTTTCTTCTCTCAAATTCTTCATAGCATATTGCATGCCCCCATGTCTTTCTTTGACACTACTCCATCCGGGAGAATTCTAAGCAGGGCATCCACTGATCAGACCAACGTTGACATCTTTATCCCCTTGTTCCTGAATTTTGTGGTGGCCATGTACATTACAGTGATTAGCATCTTCATTATCACATGTCAAAACTCTTGGCCAACAGCTTTCTTGTTAATTCCTCTTGCTTGGTTAAACATTTGGTACCGGGGTTATTTTCTTGCTTCATCTCGTGAGCTAACTCGCTTGGATTCAATTACAAAAGCACCTGTGATTCATCATTTTTCAGAAAGCATTTCCGGGGTCATGACAATTCGCGCATTCAGAAAGCAAAAGGAATTTTGTGGAGAAAATATCAAACGAGTGAACGCTAATTTGAGAATGGATTTCCACAACTTCAGTTCCAATGCGTGGTTGGGTTTCCGCCTAGAATTACTTGGAAGCTTTGTTTTTTGCTGTTCGGCTCTGTTCATGATCATGTTACCCAGCAGTATCATAAAGCCAGAAAATGTTGGAATGTCTCTCTCATATGGATTGTCATTAAATGCCGTGATGTTCTGGTCAATATATATGAGCTGTTTCATTGAAAACAAAATGGTATCCGTTGAGAGGATTAAACAGTTCACAAATATTCCATCGGAAGCAGAATGGAACATTAAGGATCGTTTGCCTCCTTCAAATTGGCCCGGTCAAGGCCATGTTGATATCAAAGACTTGCAGGTCAGATATCGTCCAAACACTCCTTTGGTTCTTAAAGGCATCACCTTAAGCATCAATGGAGGAGAAAAGGTTGGTGTTGTTGGCAGAACTGGGAGTGGAAAATCAACTTTGATTCAAGTTTTCTTCAGACTGGTGGAACCTTCAGGAGGGAAAATAATCATTGATGGCATTGACATATCCGCCTTAGGTCTTCATGATCTTAGATCACGCTTTGGAATCATCCCTCAGGAGCCTGTCCTTTTTGAAGGAACTGTCAGAAGTAACATTGATCCAACTGGAATGTATACAGATGAAGATATATGGAAGAGTTTGGAACGTTGTCAACTAAAAGATGTAGTAGCTTCGAAGCCTGAAAAGCTTGACTCCTCAGTGGTTGATAATGGAGATAACTGGAGTGTGGGGCAGAGGCAGTTGCTTTGTTTAGGGAGGGTTATGCTAAAGCAAAGCAGGTTGTTGTTTATGGATGAGGCAACAGCTTCTGTTGATTCTCAAACCGACGCTGTAATTCAGAAGATCATCCGAGAAGACTTCGCTGCACGTACTATTATCAGCATTGCTCATAGAATACCAACGGTCATGGACTGCGATAGAGTTCTAGTTGTAGATGCAGGGCGAGCAAGAGAATTTGACAAACCATCGAACTTGCTACAAAGGCAATCACTGTTTGGGGCTTTAGTTCAAGAGTATGCTAACCGCTCGAGTGGGCTATGA 4518 0.4212 MSSEAFTWITYLSCSPSRDTFLSTSSLPQWLRFIFLSPCPQRAIFSAVDILLLLTLFVFAVIKLYSRFTSNGNPNSELNKPLIRNNAASDRTTLWFKLTLIVSAVLTILYTVACILLFSSSTKVPWKQIDGLFWLVQAVTQLVLAILIIHEKRFEAVVHPLSLRIYWIASFIIVSLFTASGVIRLVSVELEDGINFSFMVDDIVSFISLPLSLFLLCVAVKGSTGIESREETQSLIDDETKLYDKSNVTGFASASAVSKAFWIWINPLLSKGYKSPLKIDEIPSLSPQHRAERMSVIFESKWPKSDERSKHPVRTTLVRCFWKEIAFTAFLAVVRLCVMFVGPVLIQSFVDFTSGKGSSPYEGYYLVLVLLCAKFVEVLTTHHFNFNSQKLGMLIRCTLITSLYKKGLRLSCSARQDHGVGPIVNYMAVDTQQLSDMMLQLHAVWMMPFQVGIGLFLLYNCLGASVLTALVGLLGVLAFVVVATKRNKRFQFNAMMNRDSRMKAVNEMLNYMRVIKFQAWEEHFNERISGFRKSEFDWLSKFLYSICSNIIVLWSTPMLISTLTFGTAIFLGVPLDAGTVFTTTTVFKILQEPIRTFPQSMISLSQALVSLGRLDRYMSSRELLNDSVEREEGCDGHTAVEVTDGTFSWDDDGLVQDLKNINLEINKGELTAIVGTVGSGKSSLLASILGEMHKISGKIKVSGSTAYVAQTSWIQNGTIEENILFDLPMNRQKYNEVVRVCCLEKDLEMMEHGDQTEIGERGINLSGGQKQRIQLARAVYQDSDIYLLDDVFSAVDAHTGTEIFKECVRGSLKGKTVILVTHQVDFLHNVDLIMVMREGTIVQSGKYNDLLASGMDFSALVAAHETSMELVEQGAGMPGENLNKPMKSPRAASNNKEANGESNSLEQPKSGKEGSKLIKEEERETGKVSFHIYKLYCTEAFGWWGIIGVIFLSVLWQAAMMASDYWLAYETSEERAQLFNPSLFISIYAIIAAVSVILIVLRSYWVTILGLKTAQIFFSQILHSILHAPMSFFDTTPSGRILSRASTDQTNVDIFIPLFLNFVVAMYITVISIFIITCQNSWPTAFLLIPLAWLNIWYRGYFLASSRELTRLDSITKAPVIHHFSESISGVMTIRAFRKQKEFCGENIKRVNANLRMDFHNFSSNAWLGFRLELLGSFVFCCSALFMIMLPSSIIKPENVGMSLSYGLSLNAVMFWSIYMSCFIENKMVSVERIKQFTNIPSEAEWNIKDRLPPSNWPGQGHVDIKDLQVRYRPNTPLVLKGITLSINGGEKVGVVGRTGSGKSTLIQVFFRLVEPSGGKIIIDGIDISALGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTGMYTDEDIWKSLERCQLKDVVASKPEKLDSSVVDNGDNWSVGQRQLLCLGRVMLKQSRLLFMDEATASVDSQTDAVIQKIIREDFAARTIISIAHRIPTVMDCDRVLVVDAGRAREFDKPSNLLQRQSLFGALVQEYANRSSGL* 1506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0147 1505 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 88 1504 - -
Apr8g0147 1505 Gene3D ABC transporter type 1, transmembrane domain 909 1244 IPR036640 GO:0005524|GO:0016021
Apr8g0147 1505 Gene3D ABC transporter type 1, transmembrane domain 312 618 IPR036640 GO:0005524|GO:0016021
Apr8g0147 1505 CDD ABCC_MRP_domain2 1261 1481 - -
Apr8g0147 1505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 638 861 IPR027417 -
Apr8g0147 1505 MobiDBLite consensus disorder prediction 887 910 - -
Apr8g0147 1505 Pfam ABC transporter 1280 1428 IPR003439 GO:0005524
Apr8g0147 1505 Pfam ABC transporter 658 791 IPR003439 GO:0005524
Apr8g0147 1505 Gene3D - 1246 1496 IPR027417 -
Apr8g0147 1505 Pfam ABC transporter transmembrane region 327 593 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr8g0147 1505 Pfam ABC transporter transmembrane region 947 1200 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr8g0147 1505 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 326 606 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr8g0147 1505 SUPERFAMILY ABC transporter transmembrane region 943 1243 IPR036640 GO:0005524|GO:0016021
Apr8g0147 1505 CDD ABC_6TM_ABCC_D2 946 1238 IPR044726 GO:0140359
Apr8g0147 1505 SMART AAA_5 1289 1473 IPR003593 -
Apr8g0147 1505 SMART AAA_5 667 848 IPR003593 -
Apr8g0147 1505 MobiDBLite consensus disorder prediction 875 916 - -
Apr8g0147 1505 CDD ABCC_MRP_domain1 640 840 - -
Apr8g0147 1505 CDD ABC_6TM_ABCC_D1 327 614 IPR044746 GO:0140359
Apr8g0147 1505 Gene3D - 619 876 IPR027417 -
Apr8g0147 1505 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1263 1497 IPR003439 GO:0005524
Apr8g0147 1505 PANTHER ABC TRANSPORTER C FAMILY MEMBER 4 88 1504 - -
Apr8g0147 1505 ProSitePatterns ABC transporters family signature. 765 779 IPR017871 GO:0005524
Apr8g0147 1505 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 947 1226 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr8g0147 1505 SUPERFAMILY ABC transporter transmembrane region 317 619 IPR036640 GO:0005524|GO:0016021
Apr8g0147 1505 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 640 863 IPR003439 GO:0005524
Apr8g0147 1505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1256 1496 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0147 Apr-Chr8 1089912 1097593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0147 1261 1503 Calmodulin-binding Proteins AT2G36910 30.000 4.18e-31 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0147 - K05666 gmx:100793361 2662.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0147 8 1089912 1097593 Apr8g0147 8 1089912 1097593 ECH