Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0135 ATGATCAGCATTTCATGCCATGCATTACTGCTGCCGTTTATTTTTCTTTCATTACTCGCAAATACTGACCAAATGGTAGTTGCTAAAGGGAAAGACAACGTTAGAGATGCTTGTAGAGTAACTAGGTATCAAAAACTTTGTGTCCGCTCGCTAGCACCATTCTCTAACAGTGCTGGAAGAAGTCCCAGCAAGTGGGCAAGAGCAGGAGTGTCAGTGACAATTGGTGAGATTAAGAATGTTGAAGCATATCTGGCAAAGTTGAAGAGGCACGGGCGTATAAGAGGAAGAGAAAGAGTTGCACTTTCTGATTGCGTTGAGTCTTTTTCAGATGCCCTTTATGAGCTTCATAAATCACTTGGTGTGCTCAGAAGGCTTAGCAGAAGCACGTTTGGGACCCAGACGGGAGACATCAAGACATGGATAAGTGCAGCACTCATTAACGAAGATACTTGCCTTCATGGGTTTCAAGGAAAAAAGGAGAGAGAAATTAAACTGCTGCTAAATCGGGTTCTGAAAGTCTATTATGTAACCAGTAACGCTCTAGCTCTTGTCAACAAACTTGCTACTACAGGAATAGGAAGCATGTCTGATCCCTAG 597 0.4288 MISISCHALLLPFIFLSLLANTDQMVVAKGKDNVRDACRVTRYQKLCVRSLAPFSNSAGRSPSKWARAGVSVTIGEIKNVEAYLAKLKRHGRIRGRERVALSDCVESFSDALYELHKSLGVLRRLSRSTFGTQTGDIKTWISAALINEDTCLHGFQGKKEREIKLLLNRVLKVYYVTSNALALVNKLATTGIGSMSDP* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0135 198 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 189 IPR035513 -
Apr8g0135 198 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 187 IPR006501 GO:0004857
Apr8g0135 198 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 16 182 - -
Apr8g0135 198 CDD PMEI-like_3 37 189 - -
Apr8g0135 198 Pfam Plant invertase/pectin methylesterase inhibitor 33 183 IPR006501 GO:0004857
Apr8g0135 198 SMART PMEI_2 29 183 IPR006501 GO:0004857
Apr8g0135 198 PANTHER PECTINESTERASE INHIBITOR-LIKE 16 182 - -
Apr8g0135 198 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 187 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0135 Apr-Chr8 1024503 1028489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0135 34 195 Carbohydrate Esterase AT3G14310 32.335 7.25e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0135 - - gmx:100791264 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0135 8 1024503 1028489 Apr8g0135 8 1024503 1028489 ECH