Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0127 ATGACTGAAGGAACATCTCCCGGAGCGAAGGGGAAGAAGAAGGGAGCGAGCTTCGTGATCGATTGCGGGAAGCCGGTGGAAGATAAGATCATGGACATTGCTTCCCTTGAGAAGTTCCTTCAGGAGAGGATTAAGGTCGGCGGCAAGGCCGGTGCACTCGGCGATTCCGTTACCGTTACGAGGGACAAGAGCAAGATCACCGTCAACTCCGACAGCAACTTCTCTAAAAGGTATCTGAAATACTTAACCAAGAAGTACTTGAAAAAACACAACGTGAGGGATTGGCTCCGGGTGATTGCCTCCAACAAGGACAGAAATGTCTATGAGTTGAGATACTTCAACATTGCTGAGAATGAGGGTGAAGAGGAGGACTGA 375 0.4933 MTEGTSPGAKGKKKGASFVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTRDKSKITVNSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0127 124 PANTHER 60S RIBOSOMAL PROTEIN L22 1 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
Apr8g0127 124 Coils Coil 121 124 - -
Apr8g0127 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
Apr8g0127 124 PANTHER 60S RIBOSOMAL PROTEIN L22-2 1 124 - -
Apr8g0127 124 Gene3D - 6 124 IPR038526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0127 Apr-Chr8 985577 988005 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0127 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 84.677 7.14e-65 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0127 K02891 - gmx:100500073 214.927