Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0115 ATGGTTTTCAAGGGCTTCTCTTTTCTTACCATCTCCTATATTCTTTCCTTTTTGCTCTTGGCATCATTGTCCACATCAGATGGCAGTGCATTCTCCATCGTTCCACCCGAAACCATTTGCGGGTCCACCGTAGACCCTAATTATTGTAAAAATGTGCTTGCTAATCAAAATGGCAATGTCTTCGACTATGGTCGCTTTTCTTTCCGAAAGTCCTTGTCCCAGGCTCGTAAATTCTTGAACTTAGTAGACTCATATCTTCAAAGTAGCTTCTCTTCGTCTCAATCCACAACTGGCGCTCTTCAAGATTGCCGATTCCTTGCTGAACAAAGTTTAGAGTACTTATCAAACATCTATGCTACTGCTAACCAATCTAGTGGCGTTCTTAACCCTTCTGAAGCCGAAAGTTCTGTAACCTATCTCAGTGCCGTTTTGACTTGCCACCAAACATGTTTGGATGGCCTACAACAAAGTTCAGCATCAGATTCAAGAGTGAAAAACGACTTGTCGTCGTCACTCTCTGATGACTCAAAGCTTCACAGTCTCACATTGGCTTTGTTCCTTGAGGGTTGGGTGCCTGAGAAGACAATCATAAGATCATGGCCACAAAATGGGAGACATTTGGATTTCTCACATGGTCGTTTACCGTTGAAGATGTCAAACCGAGTACGTTCCATTTATGATTCCGCAAGACACCATGGGAGAAAACTTCTCCAAACAGGAGATAACAGCCAGAGCGTTCAGAGTATGTATCCATTGACAAAAGCAAGAAGTATTTGA 777 0.4273 MVFKGFSFLTISYILSFLLLASLSTSDGSAFSIVPPETICGSTVDPNYCKNVLANQNGNVFDYGRFSFRKSLSQARKFLNLVDSYLQSSFSSSQSTTGALQDCRFLAEQSLEYLSNIYATANQSSGVLNPSEAESSVTYLSAVLTCHQTCLDGLQQSSASDSRVKNDLSSSLSDDSKLHSLTLALFLEGWVPEKTIIRSWPQNGRHLDFSHGRLPLKMSNRVRSIYDSARHHGRKLLQTGDNSQSVQSMYPLTKARSI* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0115 258 MobiDBLite consensus disorder prediction 237 258 - -
Apr8g0115 258 PANTHER PECTINESTERASE 19 241 - -
Apr8g0115 258 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 19 241 - -
Apr8g0115 258 MobiDBLite consensus disorder prediction 238 258 - -
Apr8g0115 258 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 188 IPR035513 -
Apr8g0115 258 CDD PMEI-like_3 38 161 - -
Apr8g0115 258 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 186 IPR035513 -
Apr8g0115 258 SMART PMEI_2 31 185 IPR006501 GO:0004857
Apr8g0115 258 Pfam Plant invertase/pectin methylesterase inhibitor 37 184 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0115 Apr-Chr8 920883 921798 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0115 38 242 Carbohydrate Esterase AT4G02330 43.439 6.62e-45 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0115 K01051 - aprc:113873813 477.248