Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0113 ATGAACAACCTCAAAATAAAAACACCCTTTCTGCCTCTTGCATCCATTCTTACCTTAACTTTTGCACTACTCTTCTCAGGAACACATTCCATTACAAGAGCACCAGAAAAAGAGCTCCATTTCCAAAAGCACGTGCAAGTAGCCCACTCCACATGTGAAGGAACACTCTACCCAGACCTATGCGTCTCAACTCTTGCCACATTCCCAGATCTTGCCACAAAATCTGTCCCACAAGTGATTTCCTCAGTGGTTAACCATGCCATGTACGAGGTAAAATCATCATCCTACAACTGCAGTGACCTCAAAAAGAAGCTCAGAAATCTCAACCCACTTGACCAGAGAGCTCTCGATGACTGTCTCAAACTGTTTGATGACACCAACGTGGAGCTCAAAACCACCATTGAAGATCTCTCCAAAAGCACAATAGGGTCTAAGCGCCACCACGACTTGCAGACTCTGCTAAGTGGCGCAATGACCAACTTGTACACGTGCCTCGACGGGTTTGCTTACAGCAAAGCCAAAGTGAGAGAAAGAATCGAGAAGAAGTTGCTTGAGATATCACATCATGTTAGCAACTCTTTGGCCATGCTTAAGAAAGTGCCTGGAGTGAAGAAAACAACATCCAAATCTGAGGTTTTCCCTGAATATGGAAAGATGAAAAAGGGTTTCCCCTCGTGGGTTTCATCCAAAGACCGAAAGCTTCTCCAAAGCGCTGTCAATCAGACCAAGTTCGATCTTGTCGTTGCCAAAGATGGCACTGGCAATTTCACCACTATAGGAGAAGCACTCGCTGTGGCTCCCAACTCCAGCACAACCAGTGATGGCAGGTTCGTGATACACATAAAGGCTGGGGCATATTTCGAGAATGTGGAAGTGATCAGGAAGAAGACCAATCTGATGTTTGTTGGAGATGGGATTGGAAAGACAGTGGTGAAAGCGAGTAGGAATGTTGTGGACGGGTGGACCACTTTCCAATCCGCTACATTTGCTGTGGTAGGAGAGGGATTCATAGCAAAAGGTATAACGTTTGAGAACTCAGCAGGGCCGGAGAAGCACCAAGCAGTGGCACTGAGGAGTGGTTCTGACTTTTCAGCTTTCTACCAATGCAGCTTTGTTGGGTATCAAGACACTCTCTACGTCCATTCCCTTCGCCAATTCTATCGTGAATGCGACATCTACGGCACTGTAGACTTCATTTTTGGCAATGCAGCCGTTGTCTTCCAAAACTGCAACTTATACGCACGCAAGCCAAACCAAAATCAGAAGAACTTGTTCACTGCACAAGGCAGAGAAGACCCTAACCAAAACACTGGCATATCCATTTTGAACTGTAAGATTGCAGCTGCTGCAGACTTAATCCCAGTTAAATCCTCGTTCAAAAGCTATCTGGGTCGTCCTTGGAAACTCTATTCAAGAACCGTTTATCTCAAATCTTTCATGGAGGATCTTATTGACCCAGCAGGGTGGTTGGAATGGAATGGCACGTTTGCATTGGATACATTGTATTATGGAGAGTACATGAATAAGGGACCAGGTTCAAACACAAGTGCTAGAGTTACGTGGCCAGGTTACAGGGTTATTAACAGCTCCACTGAGGCAAGCCAGTTCACAGTTGCCCAGTTTATACAAGGAAATGAATGGTTGAACTCTACAGGCATTCCATTCTTTCCTAATTTGAGTTAA 1683 0.4522 MNNLKIKTPFLPLASILTLTFALLFSGTHSITRAPEKELHFQKHVQVAHSTCEGTLYPDLCVSTLATFPDLATKSVPQVISSVVNHAMYEVKSSSYNCSDLKKKLRNLNPLDQRALDDCLKLFDDTNVELKTTIEDLSKSTIGSKRHHDLQTLLSGAMTNLYTCLDGFAYSKAKVRERIEKKLLEISHHVSNSLAMLKKVPGVKKTTSKSEVFPEYGKMKKGFPSWVSSKDRKLLQSAVNQTKFDLVVAKDGTGNFTTIGEALAVAPNSSTTSDGRFVIHIKAGAYFENVEVIRKKTNLMFVGDGIGKTVVKASRNVVDGWTTFQSATFAVVGEGFIAKGITFENSAGPEKHQAVALRSGSDFSAFYQCSFVGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQNCNLYARKPNQNQKNLFTAQGREDPNQNTGISILNCKIAAAADLIPVKSSFKSYLGRPWKLYSRTVYLKSFMEDLIDPAGWLEWNGTFALDTLYYGEYMNKGPGSNTSARVTWPGYRVINSSTEASQFTVAQFIQGNEWLNSTGIPFFPNLS* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0113 560 Pfam Plant invertase/pectin methylesterase inhibitor 49 196 IPR006501 GO:0004857
Apr8g0113 560 CDD PMEI-like_3 50 202 - -
Apr8g0113 560 Gene3D Invertase/pectin methylesterase inhibitor family protein 46 202 IPR035513 -
Apr8g0113 560 ProSitePatterns Pectinesterase signature 2. 392 401 IPR033131 -
Apr8g0113 560 SMART PMEI_2 43 196 IPR006501 GO:0004857
Apr8g0113 560 TIGRFAM PME_inhib: pectinesterase inhibitor domain 17 199 IPR006501 GO:0004857
Apr8g0113 560 Pfam Pectinesterase 245 545 IPR000070 GO:0030599|GO:0042545
Apr8g0113 560 PANTHER PECTINESTERASE 14 558 - -
Apr8g0113 560 PANTHER PECTINESTERASE 14 558 - -
Apr8g0113 560 SUPERFAMILY Pectin lyase-like 242 557 IPR011050 -
Apr8g0113 560 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 200 IPR035513 -
Apr8g0113 560 Gene3D - 239 559 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0113 Apr-Chr8 909135 913530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0113 72 559 Carbohydrate Esterase AT4G02320 57.086 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0113 K01051 - gmx:100802881 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0113 8 909135 913530 Apr8g0113 8 909135 913530 ECH