Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0102 ATGGCGGCATTGTCATTTTCAGTGGCATCTGTGGTGGAAGATGTGCTTCAACAGCACGGTACTCGCCTTAAAGATCTTGATTTGGAATCCAGAAAAGCAGAAGAAGCGGCATTCAGAAGGTATGAAGCAGCAGGGTGGCTGAGAAAAATGGTTGGAGTTGTTGCAGCCAAAGATTTACCAGCAGAGCCCTCTGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATCATTCTCTGTAATGTCCTTAACAAGGTTCAACCTGGCGCTGTACCCAAGGTTGTGGAGAGTCCTGTTGATTCTGCACTCATCCCTGATGGAGCACCATTATCCGCATTTCAGTATTTTGAAAATGTGAGGAACTTTCTGGTGGCTATCCAGGAAATTGGAATTCCTACCTTTGAGGCATCTGATCTGGAACAAGGGGGGAAATCAGCCAGGATTGTGAACAGCGTCTTAGCCCTTAAATCCTATAGTGAATGGAAACAGACTGGGGCTGATGGTGTGTGGAAATTTGGTGGAACTATCAAACCTCCAATCTCTGCAAAAACTTTCGTGAGAAAAAACTCTGAGCCATTTACTAATTCCTTGTCAAGGAGCTCGTCCATCAATGATAAATCTACGATTGCCTTTACCTCTGATGTTGAGTCTAATAAAATGTCTGGGTCTCAATCTCTGAGTATGCTTGTTCGTGCAATACTATTGGATAAGAAGCCAGAAGAAGTTCCAATGTTGGTTGAATCTGTCCTAAATAAGGTCGTAGAGGAGTTCGAGAATCGCATTGCAGGTGAACAGACAAAAATTTCAAGAGGTGCTGCATCACAAAGCAATGGATCTGTATCGAAGTTTGTTATGGCAGATAAAAAGATTCCTATGGTGACAAAGAAAGAGGAATTCCTCCATAAAAACCGTGTTGATGATGAGGAATCAAAAAAACAACTTCTGAAGCAGCAAATGCTCTTTGATCAACAGCAAAGAGACATTCAAGAACTAAAGCATACAATTCACATTACCAAAGCTGGTATGCGGTTCCTTCAAATGAAATTTCACGAGGAGTTCTCCAATCTAGGATTGCACGTTCATAGCTTAGCTCATGCTGCTTCTGGATATCATAGAGTTCTTGAAGAAAATCGCAAATTATACAATCAAGTCCAGGATCTTAAGGGAAGTATTAGGGTGTACTGTCGAGTAAGACCCTTCTTATCTGGACAACCAAATTATTTGAGCACAGTGGACAACATAGAAGATGGAACTATCACAATTAATATTCCTTCGAAGAATGGCAAAGGGCGTAGACCCTTCAACTTCAACAAAGTTTTTGGACCATCTGCAACCCAGGCGGAGGTATTCTCTGATATGCAGCCCCTCATTAGGTCTGTCCTTGATGGTTACAATGTTTGCATATTTGCTTATGGCCAAACAGGATCAGGAAAAACTTACACTATGACTGGACCGAAAGAGATCACAGAAAAAAGTCAAGGAGTGAATTACAGGGCTCTAAGTGATTTGTTTATCACGGCTGATCAAAGAAAGGACACTTTTCGCCATGATGTGTATGTTCAAATGATTGAGATTTACAATGAGCAAGTCAGAGATCTATTGGTTACTGATGGATCAAACAAAAGATTAGAAATTCGTAGTAATTCTCATAGAGGGCTCAGTGTCCCAGATGCAATCCTAGTCCCAGTATCATCAACAAATGATGTTATTGATCTAATGAACCTGGGCCAAAGGAACCGTGCAGTTGGTGCAACAGCGCTTAATGACCGTAGTAGCCGATCTCACAGTTGCTTGACTGTTCATGTTCAAGGAAGAGACTTGACATCTGGTACTATCATACGTGGATGCATGCATCTGGTTGACTTGGCAGGAAGTGAGAGAGTTGACAAATCTGAGGCTACAGGAGATAGACTAAAGGAGGCACAGCATATTAACAAATCTCTCTCAGCTTTAGGCGATGTCATTGCTTCCCTTGCTCAGAAAAACCAACATGTCCCTTACAGAAATAGCAAACTCACACAATTACTCCAAGATTCACTTGGAGGACAGGCCAAGACATTAATGTTTGTTCACATAAGTCCAGGGGTTGATGCTATTGGAGAAACAATTAGCACACTAAAATTTGCAGAACGAGTTGCTACGGTTGAACTTGGTGCTGCTCGAGTAAACAAGGATGGAGCAGATGTCAAAGAGCTCAAAGAACAGATAACGATCCTTAAGGCAGCATTGGCAAGAAAAGAAGGGGAGTCAGAACATTCTTTATCTGGAAGCACCGGAAAATGTAGGACAATGGCTAGTGAGCTATCACCTTACCATGCAAACCAGCGTGATGCAAATATTGTGAGTGGCCTTGGGTGTAGACAACCCATGATTGATGTAGGCAACATAGAGCTTCACAGTAATACCACATTGAGGCAAAAATCTCAGAGCTTTGATTTTGATGAGATATCAGCAAATTCACCACCCTGGCCCCCAGTGAATAGTCCTGGACAAAACTATGGGGAAGATGATAAAGAAACTGGTTCAGGAGAGTGGGTTGATAAGGTGATGGTAAACAAGCAAGATCCAAACAGAACTGAGAACATGTTAGGGTGTTGGGAAGCAGACAATGGAAACTTATCTGAGGTCTTTTATCAGAAATATCTCCAAGATTCTTCCAAAATATACTCAGAACGATCCTACAATATGTTCATGGGAAGCAACCAGTTTAACATTGCTGGTTCAGATGACATGGATGATCTTGATGATGCAACAACTGATTCCTCAGAACCTGATTTACTTTGGCAATTTAATCATTCCAAACTCACAAGCGTAACCAATGTTAATGCATCAAAGACTACGAGATCTGTCTCAAAGCCAGCAAATAGCCCAGGATTGAGCAAGAATATAATTCATTCTTCTCTTGGTCCTTCACCTTCCCGGAAACAAACAATTGGGGTCTCACATCGAACAGGAAGGCATCCAGCTCCAGTTGACATGAAACGTAAAACTGGGAGTAGAAAATAA 3003 0.4186 MAALSFSVASVVEDVLQQHGTRLKDLDLESRKAEEAAFRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVLNKVQPGAVPKVVESPVDSALIPDGAPLSAFQYFENVRNFLVAIQEIGIPTFEASDLEQGGKSARIVNSVLALKSYSEWKQTGADGVWKFGGTIKPPISAKTFVRKNSEPFTNSLSRSSSINDKSTIAFTSDVESNKMSGSQSLSMLVRAILLDKKPEEVPMLVESVLNKVVEEFENRIAGEQTKISRGAASQSNGSVSKFVMADKKIPMVTKKEEFLHKNRVDDEESKKQLLKQQMLFDQQQRDIQELKHTIHITKAGMRFLQMKFHEEFSNLGLHVHSLAHAASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFLSGQPNYLSTVDNIEDGTITINIPSKNGKGRRPFNFNKVFGPSATQAEVFSDMQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALSDLFITADQRKDTFRHDVYVQMIEIYNEQVRDLLVTDGSNKRLEIRSNSHRGLSVPDAILVPVSSTNDVIDLMNLGQRNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGTIIRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNQHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPGVDAIGETISTLKFAERVATVELGAARVNKDGADVKELKEQITILKAALARKEGESEHSLSGSTGKCRTMASELSPYHANQRDANIVSGLGCRQPMIDVGNIELHSNTTLRQKSQSFDFDEISANSPPWPPVNSPGQNYGEDDKETGSGEWVDKVMVNKQDPNRTENMLGCWEADNGNLSEVFYQKYLQDSSKIYSERSYNMFMGSNQFNIAGSDDMDDLDDATTDSSEPDLLWQFNHSKLTSVTNVNASKTTRSVSKPANSPGLSKNIIHSSLGPSPSRKQTIGVSHRTGRHPAPVDMKRKTGSRK* 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0102 1000 Pfam Kinesin motor domain 395 713 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr8g0102 1000 CDD KISc_C_terminal 387 716 - -
Apr8g0102 1000 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 997 - -
Apr8g0102 1000 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 389 746 IPR027417 -
Apr8g0102 1000 ProSiteProfiles Kinesin motor domain profile. 389 714 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr8g0102 1000 MobiDBLite consensus disorder prediction 986 1000 - -
Apr8g0102 1000 SMART ch_5 39 157 IPR001715 GO:0005515
Apr8g0102 1000 SMART kinesin_4 387 722 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr8g0102 1000 Coils Coil 16 36 - -
Apr8g0102 1000 Gene3D Kinesin motor domain 384 755 IPR036961 -
Apr8g0102 1000 Coils Coil 728 748 - -
Apr8g0102 1000 Gene3D - 24 182 IPR036872 -
Apr8g0102 1000 ProSiteProfiles Calponin homology (CH) domain profile. 37 159 IPR001715 GO:0005515
Apr8g0102 1000 MobiDBLite consensus disorder prediction 814 842 - -
Apr8g0102 1000 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 2 997 - -
Apr8g0102 1000 Pfam Calponin homology (CH) domain 40 159 IPR001715 GO:0005515
Apr8g0102 1000 SUPERFAMILY Calponin-homology domain, CH-domain 40 169 IPR036872 -
Apr8g0102 1000 MobiDBLite consensus disorder prediction 943 978 - -
Apr8g0102 1000 MobiDBLite consensus disorder prediction 943 1000 - -
Apr8g0102 1000 PRINTS Kinesin heavy chain signature 462 483 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr8g0102 1000 PRINTS Kinesin heavy chain signature 584 601 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr8g0102 1000 PRINTS Kinesin heavy chain signature 615 633 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr8g0102 1000 PRINTS Kinesin heavy chain signature 664 685 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0102 Apr-Chr8 843698 849976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0102 377 714 Calmodulin-binding Proteins AT5G65930 43.023 5.26e-78 276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0102 8 843698 849976 Apr8g0102 8 843698 849976 ECH