Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0077 ATGGTCGTGAGGCCTTCATCTTTGCTGATCCTACTGATGGAGAAACGAGTGACTTTGAACTCAAAAACCGTTGTGTCCCAATTGAAATCAGAAATTGAGTGCTCAGCTGAATTGTTACACCCCGTGAAATCATCATCAACCAATTTAGCAAGATTTCTAAGTTCAGCCCTTGATACTACTCATATCTCCTTTTCTGATATTGAGAACAAGGTTGCTCCGTTATTATATCAAGCATTTGAGACAATTCCTTACTTAGCTCAAATCTCATACATAGGGATGGAAGGTCTCTTTTTCTCGTACTACACTGATCACGATCAAGCTTTAGCAATGTACACTAATTCATCATCATCATTTTCTTGTTGGGGTGCCTCAAATAAATCCATGTACTATATTCAACCGGTAAATCGTGAAACTGGAGAGGTTTATGGGGAAGCCAAAGCCATAGTTTCTAACCCCTTTATCAATGCAACTTGGATTGAAGAAACAGTTAATGTGTCAAGTGGGTTTGCCTCATTGGGAACCAAGTGGAGCAATGGTCGTGATCTTTTGTTCCTAAGTTCAGCTAGAATCACAAGAACAGGAGTGATCTCTCTTGGGTTTTCAGCAAAGGCAATAACTGATTTTGTCAATCGCATTGACCAACAAGGCATAAGGTCCTACTTGGCTACCAAAGATGGAAAAGTTGTTGTTGAAGGGATTCAACATATCCGTTTGGTCCTTTCTAATGATACGGTTTCCATCCAATCAGTGAATGCAAATGGTGATCGCACAAGTAATGAGGGCACTGTCTCATGCAAAGATGAAGCCGTTGCTTCTAGTTTGAATATTCAGGATACTCAATATTTAATTCACTGCTACACCATTGATATAATGGGAATTGAATCGGTGTATGTTTTGGCTGTCCCACAAAATGAATTCGTGAGCTTTGAATTCAATTACAAGAAAAAGGGATTGACCCTGTTGATCGCAACGATGGTCACAATATTTATTGCGTTCTTCAGTTTTCTATTGATAAATGCAAAAGCTAAAATGCGAGAAATGCATTTGTGTGCCTCACTCATCAAACAGATGGAAGCCACCCAACAAGCTGAGAGAAAGAATATGAATAAGAGCATCGCTGTTGCTAGTGCCAGCCATGATGTTCGCGCTTCTCTCGCGGGCCTTACCGGTTTGATAGAAATGTCCTATGAGCTTGTTGTCCATGGTTCAGAATTGGATACCAATTTAAGACAAATGGATAACTGTACCCAAGACTTACTAGGACTGTTAAATTCTATACTTGACATAAGCAAAATTGAGGCAGGAAAAATGCAACTTGAAGAAGAGGAATTTGATGTGTACCATCTCCTGGAAGATGTAGTTGATTTTTACCATCCCGTGGCTTTTAAAAAAGGTGTAGATCTTGTTCTGGACCTTTGTAATGGTTCTCTTATGAGGAACTCACGCGTGAAAGGTGACAGGGGAAAACTAAAACAAGTTTTGAGTAATTTACTGAGCAATGCTGTTAAATTTACCGACGAAGGGCACATAGTAGTTCGGGCATGGATCCAGAAGCCGAGCATGAAGAACTCAACGATCACTAGTAACCAATGTGGTTTCAAGAAATATTTATCATGCATATTGTATAAGAAAAACGAAACGCATATTGATATGGAACCCATGAATTCAATCCAACAAGATCCAAATTGCATGGATTTTATATTTGAAGTGGATGACACGGGAAAAGGAATTCCTAAAGAGAATCACAAGTCTGTGTTCGAGAATTACGTCCAAGTCAAAGAAACTGCTCTTGGCCATGGAGGAACTGGCTTGGGACTTGGGATTGTGAAGTCGTTGGTGCGTTTGATGCATGGAGATATTGAAATTGTGGACAAAGATATTGGAAACAAAGGAACATGCTTCAGGTTCAATGTGCTCCTCACTTCATGCGAGTGTGAGACAATGATAGATGGTAGCAGTAGCACAAGGGATGGTGTTGAATATGGATCAGGAGACAGAAACCAAGCTGAGGGACGAACCATGCATACTACAGATCCTGGTTGCTCAATGAGTTCAAGGATACATATTTGCAGCTCCAGTCTTAAGCCTGAGACTTCACGTGTGGTTCTTTTGATTGCTGATGAGGAGAGAAGAAGGACTTCACAAAGGTTCATGGAGAGCTTAGGGATTAATGTTAAGGTTGTGAAGCGATGGAAACAATTGTTTTATACTCTCAAGAAGATCAAACAGAAGGGTCATCATTCCAGTGGCCAAAGTTCTCCAGGGTCTTCAAATTTGAGTTCTCGATCTACCTCGCATAATTCTTATGCAAGAGCCACAAGGGTTCCTTTCAGTGCTATGGATGCAACTGAGTTTATACATTCAGTCTTCCAGAAGACAGGATTGTATCCAACTTCAGAGAAGACCTTAACAACCCTTGTAAGGTTGTTTGGTTGGACAACCCTCTTATGCGTAGTATCAACTTCAAAGACCTTGATCAAGATGACATTGTCATATCCAAACCATTTCATGGTACTCGTTTGTTCCAAGTTATAA 2535 0.4028 MVVRPSSLLILLMEKRVTLNSKTVVSQLKSEIECSAELLHPVKSSSTNLARFLSSALDTTHISFSDIENKVAPLLYQAFETIPYLAQISYIGMEGLFFSYYTDHDQALAMYTNSSSSFSCWGASNKSMYYIQPVNRETGEVYGEAKAIVSNPFINATWIEETVNVSSGFASLGTKWSNGRDLLFLSSARITRTGVISLGFSAKAITDFVNRIDQQGIRSYLATKDGKVVVEGIQHIRLVLSNDTVSIQSVNANGDRTSNEGTVSCKDEAVASSLNIQDTQYLIHCYTIDIMGIESVYVLAVPQNEFVSFEFNYKKKGLTLLIATMVTIFIAFFSFLLINAKAKMREMHLCASLIKQMEATQQAERKNMNKSIAVASASHDVRASLAGLTGLIEMSYELVVHGSELDTNLRQMDNCTQDLLGLLNSILDISKIEAGKMQLEEEEFDVYHLLEDVVDFYHPVAFKKGVDLVLDLCNGSLMRNSRVKGDRGKLKQVLSNLLSNAVKFTDEGHIVVRAWIQKPSMKNSTITSNQCGFKKYLSCILYKKNETHIDMEPMNSIQQDPNCMDFIFEVDDTGKGIPKENHKSVFENYVQVKETALGHGGTGLGLGIVKSLVRLMHGDIEIVDKDIGNKGTCFRFNVLLTSCECETMIDGSSSTRDGVEYGSGDRNQAEGRTMHTTDPGCSMSSRIHICSSSLKPETSRVVLLIADEERRRTSQRFMESLGINVKVVKRWKQLFYTLKKIKQKGHHSSGQSSPGSSNLSSRSTSHNSYARATRVPFSAMDATEFIHSVFQKTGLYPTSEKTLTTLVRLFGWTTLLCVVSTSKTLIKMTLSYPNHFMVLVCSKL* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0077 844 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 485 641 IPR003594 -
Apr8g0077 844 MobiDBLite consensus disorder prediction 747 765 - -
Apr8g0077 844 SMART HisKA_10 369 435 IPR003661 GO:0000155|GO:0007165
Apr8g0077 844 CDD HisKA 374 431 IPR003661 GO:0000155|GO:0007165
Apr8g0077 844 PRINTS Bacterial sensor protein C-terminal signature 566 580 IPR004358 GO:0016310|GO:0016772
Apr8g0077 844 PRINTS Bacterial sensor protein C-terminal signature 584 594 IPR004358 GO:0016310|GO:0016772
Apr8g0077 844 PRINTS Bacterial sensor protein C-terminal signature 600 618 IPR004358 GO:0016310|GO:0016772
Apr8g0077 844 MobiDBLite consensus disorder prediction 655 678 - -
Apr8g0077 844 SMART HKATPase_4 485 642 IPR003594 -
Apr8g0077 844 PANTHER HISTIDINE KINASE CKI1-LIKE 14 792 - -
Apr8g0077 844 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 357 437 IPR036097 GO:0000155|GO:0007165
Apr8g0077 844 Gene3D - 356 436 - -
Apr8g0077 844 ProSiteProfiles Histidine kinase domain profile. 376 642 IPR005467 -
Apr8g0077 844 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 424 638 IPR036890 -
Apr8g0077 844 MobiDBLite consensus disorder prediction 745 765 - -
Apr8g0077 844 Gene3D - 437 645 IPR036890 -
Apr8g0077 844 PANTHER TWO-COMPONENT HISTIDINE KINASE 14 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0077 Apr-Chr8 628262 632657 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0077 15 784 Histidine Kinase Gene Family AT2G47430 41.392 1.74e-175 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0077 - - aprc:113873801 1612.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0077 8 628262 632657 Apr8g0077 8 628262 632657 ECH