Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0072 ATGGCTTCGATTCAACGCCCTGCGAGTTCGGGATCGTCGGAAGGAGGAGGAGATCCGCAGATGGACGATAGGAAGAGGAAGAGGATGCTGTCGAACCGCGAATCTGCGAGGAGATCGCGGATGAGGAAGCAGAAGCAGCTCGAAGACCTAACCGATGAAGCGAGTCGATTGATAAGCTCGAACGAGCAAATTGTTGAGAGCATAAGCGTGAAGGAGGATGCGTACGTGGAGATGGAAGCCGCCAACGATATCCTTAGGGCTCAGACCATGGAACTTGCAGATCGATTGCGTTTTCTCAACTCCATCCTTGAGATCGCAGAAGAAGTTAGCGGTTTCTCCGTTGAGATTCCTCAGATACCGGACCCTCTCCTCATGCCCTGGCAGATCCCTCACCCGATTCACCCTATTGTAGCTTCTGCTGACATGTTCCTGCATTGA 438 0.5251 MASIQRPASSGSSEGGGDPQMDDRKRKRMLSNRESARRSRMRKQKQLEDLTDEASRLISSNEQIVESISVKEDAYVEMEAANDILRAQTMELADRLRFLNSILEIAEEVSGFSVEIPQIPDPLLMPWQIPHPIHPIVASADMFLH* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0072 145 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 143 - -
Apr8g0072 145 Gene3D - 23 104 - -
Apr8g0072 145 SMART brlzneu 20 84 IPR004827 GO:0003700|GO:0006355
Apr8g0072 145 MobiDBLite consensus disorder prediction 1 16 - -
Apr8g0072 145 CDD bZIP_plant_GBF1 25 75 IPR045314 GO:0003700|GO:0006355
Apr8g0072 145 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 143 - -
Apr8g0072 145 SUPERFAMILY Leucine zipper domain 24 78 IPR046347 GO:0003700|GO:0006355
Apr8g0072 145 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 27 42 IPR004827 GO:0003700|GO:0006355
Apr8g0072 145 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 22 69 IPR004827 GO:0003700|GO:0006355
Apr8g0072 145 MobiDBLite consensus disorder prediction 18 52 - -
Apr8g0072 145 MobiDBLite consensus disorder prediction 1 54 - -
Apr8g0072 145 Pfam bZIP transcription factor 23 79 IPR004827 GO:0003700|GO:0006355
Apr8g0072 145 Coils Coil 33 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0072 Apr-Chr8 599650 602094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0072 12 143 bZIP Transcription Factor Family AT3G62420 55.882 1.62e-49 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr8g0072 bZIP_1 2.7e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0072 K25786 - gmx:778144 214.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0072 8 599650 602094 Apr8g0072 8 599650 602094 ECH
Apr4g0539 4 4486624 4488138 Apr8g0072 8 599650 602094 PCT