Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0068 ATGAGGCATGGGCCACAAGAAAAAAGGCGTAACCCAAGGAAGAGGATGCGTCCAAAACGACCAAAGGATCAAAGAAAGAAACAATATGGAGAGTCAGCAAATGAAGCTATTGGAACCTTGTCCGTCAAGATAAACCAGCTGAAAAAGCAAATTCAGGCGGAGAGAATTGTATCCATCAAAGAAAAAATTCAGAAGAATGAGAAGAAGCTACAGTGTCATATTTCAGAGGTCATGTCAGAAATATCAACGAGGGACTCTTCACAGACAGAGGAAAACAGGAACTGTCCAGTACTTTCTTCAAGAATTGACCATCCTTTATGTAAATTCAGTGGTTTCTCTCAAGGTTCAGGAGACAAAGACCACAGCAATCAAGATGTATTATCTGCTACAAGTATCAAAATTCCATACATTGAAAGATTACCGCCATATACATCTTGGATATTTCTGGACAGAAATCAGAGAATGGCTGAGGATCAGTCAGTTGTTGGAAGAAGACGTATCTACTATGATCAACATGGCAGTGAAGCGCTAATATGTAGTGACAGCGAGGAAGAGTTAACAGAACCTGAGGAAGAAAAACATGAATTTTCTGAGGCTGAAGACCGTGTTATATGGATGGCCTTCGAGGAACATGGATCAAACGAGGAGGTATTGAATATTGTTAGCCAATTTGTTGGGGGAACCAGTTTAGAAATTCAGGAGAGATATAAAAGTATCAAGGAAAAGAATATAGGTAGGTTGGACCAGCTTTCAGAAGCCTCAGGAGAATATGAATCTCCTGTTGGTGTAAGTCCAGAGAAAAGCCTGAGTGCTGCGTTAGATTCTTTTGATAATCTTTTCTGTCGCCGGTGCCTGATTTTTGACTGTCGTCTGCACGGATGTTCCCAACCTTTAATATATCCTAGTGAAAAGCAGACAGTTTGGTCTGAGCCTGAAGGTGATAGGAAACCATGCAGTGACCAATGTTACCTTCAGCAGTTAAAGGTTGTCAAAAGTGTGTCAGAAGAAACTTCCACATCTTGTAAAGATAAGAAAAGTACAATTATGGAAGAGGAAGATGGGATATTGGCACCCTCCAATACAGAAGAACCTAAAAGCATGGTAAAACGGAAGGTCACAGATCAGTCTGACACAGCACCATATGACTCAACACTTCCTTCTGATGATTCTCAGAATTCCTATAAAAAGTTGAAGAGAATCTCAGATGATGTAGTTACTGTAAATAGTGATTATAGCAAGAACCTAAATTTGGGTGCATGTGATGAAAGTAAACATATAATTACTTGTGCAATTTTGGACAAATCTGTTGAAGATATATCAAATAAATTAACAGATTCTTCTAGCACTTGCCATGGTGAGCATGGTGAAAGTGTTGGGGATGGACCAAAAGATCTCACAAATAAGACAGAATTGAAGTTCTCCAATCCAATGGAAGGAAATGTTGATGAGATGCTTAGTCTCTCTGATTGGAAGCCTCTAGAGAAAGAATTATACTTGAAGGGAGTGGAAATGTTTGGCAGAAACAGTTGCCTCATAGCAAGGAACTTACTTTCTGGCTTGAAGACTTGCATGGAAATATCTAGTTATATGCATTCAGGAGGAGTGTCAATGCCCCACAGATCTATTGTTGCTCCTAGTTCAATCATGGAAGACAAGGGGAAATTTGATGCAGATTGCACAGACCAAGAGATGCCATCTAGGTCACGGTTGCTGAGGAAAAGAGGAAAAACAAGGAAGTTTAAATATTCTTGGAAGTCTGCCGGCCACCCATCAATATGGAAAAGAATTGCTGATGGGAAAAACCAATCCTGCAAGCAGTATACACCTTGTGGATGTCAATCAATGTGTGGAAAGGAATGTACTTGTGTTAATGGTGGAACTTGCTGTGAAAAATATTGTGGTTGTTCGAAAAGCTGCAAAAACCGGTTTAGAGGATGCCATTGTGCCAAGAGTCAATGCAGAAGTCGACAGTGCCCATGCTTTGCTGCTGGACGTGAATGTGACCCAGATGTCTGTCGAAATTGCTGGGTTAGTTGTGGGGATGGTTCATTAGGAGAGCCACCTCGGCGTGGAGAAGGCCAATGTGGAAATATGAGGCTTCTTTTAAGACAACAACAGAGGATTCTTTTAGCGAAGTCCGATGTTGCAGGATGGGGAGCATTCTTGAAGAACCCAGTTAACAAAAATGATTATCTAGGAGAGTACACAGGTGAACTGATCTCTCACCGAGAAGCTGATAAGCGTGGGAAAATATATGATCGTGCAAACTCGTCTTTTCTTTTTGATTTGAATGATCAGTACGTTCTTGATGCTTATCGCAAAGGAGACAAGTTGAAGTTTGCAAACCACTCGTCAAACCCCAACTGCTACGCGAAGGTAATGCTGGTTGCTGGAGATCACCGAGTAGGCATATTCGCCAAGGAACACATTGATGCTAGTGAGGAGCTCTTCTACGATTATCGGTATGGTCCAGATCAAGCACCACCATGGGCTCGTAAACCTGAGGGTTCCAAGAGAGACGAATCAGCAGCTCCTCAAGGCAGAGCAAAGAAACACCAATCACATTGA 2568 0.4155 MRHGPQEKRRNPRKRMRPKRPKDQRKKQYGESANEAIGTLSVKINQLKKQIQAERIVSIKEKIQKNEKKLQCHISEVMSEISTRDSSQTEENRNCPVLSSRIDHPLCKFSGFSQGSGDKDHSNQDVLSATSIKIPYIERLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEELTEPEEEKHEFSEAEDRVIWMAFEEHGSNEEVLNIVSQFVGGTSLEIQERYKSIKEKNIGRLDQLSEASGEYESPVGVSPEKSLSAALDSFDNLFCRRCLIFDCRLHGCSQPLIYPSEKQTVWSEPEGDRKPCSDQCYLQQLKVVKSVSEETSTSCKDKKSTIMEEEDGILAPSNTEEPKSMVKRKVTDQSDTAPYDSTLPSDDSQNSYKKLKRISDDVVTVNSDYSKNLNLGACDESKHIITCAILDKSVEDISNKLTDSSSTCHGEHGESVGDGPKDLTNKTELKFSNPMEGNVDEMLSLSDWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCMEISSYMHSGGVSMPHRSIVAPSSIMEDKGKFDADCTDQEMPSRSRLLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKECTCVNGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGEGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIDASEELFYDYRYGPDQAPPWARKPEGSKRDESAAPQGRAKKHQSH* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0068 855 MobiDBLite consensus disorder prediction 832 848 - -
Apr8g0068 855 CDD SET_EZH 706 822 - -
Apr8g0068 855 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 27 853 IPR045318 GO:0006338|GO:0018024
Apr8g0068 855 Gene3D SET domain 607 823 IPR046341 -
Apr8g0068 855 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 27 853 - -
Apr8g0068 855 MobiDBLite consensus disorder prediction 1 23 - -
Apr8g0068 855 SMART CXC_2 641 678 IPR033467 -
Apr8g0068 855 MobiDBLite consensus disorder prediction 349 393 - -
Apr8g0068 855 SUPERFAMILY SET domain 607 824 IPR046341 -
Apr8g0068 855 MobiDBLite consensus disorder prediction 1 36 - -
Apr8g0068 855 MobiDBLite consensus disorder prediction 377 391 - -
Apr8g0068 855 Pfam CXC domain 645 676 IPR041355 -
Apr8g0068 855 MobiDBLite consensus disorder prediction 444 468 - -
Apr8g0068 855 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 25 855 IPR025778 GO:0031519
Apr8g0068 855 ProSiteProfiles SET domain profile. 706 821 IPR001214 GO:0005515
Apr8g0068 855 SMART set_7 706 827 IPR001214 GO:0005515
Apr8g0068 855 ProSiteProfiles CXC domain profile. 593 692 IPR026489 -
Apr8g0068 855 MobiDBLite consensus disorder prediction 826 855 - -
Apr8g0068 855 Pfam SET domain 717 820 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0068 Apr-Chr8 578611 587818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0068 695 824 C2H2 Transcription Factor Family AT2G23740 26.531 3.36e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Apr8g0068 SET 1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0068 - - gmx:100808730 1464.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0068 8 578611 587818 Apr8g0068 8 578611 587818 ECH
Apr4g0544 4 4518886 4527117 Apr8g0068 8 578611 587818 PCT