Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0044 ATGGTGGCTGAAGCAGAGATTGTGTGTCAACAGAACGTGGGTGTGTTGGATGTGAAGTATTTTCCGAATAAAGGAAGCGATATTCACGAGATCGCAGATGCAGATGCCATCTCGCCTCCGAGTTTTGACCGAGTTCGTGCTTCTGAATCAGTCTCCGCTGAGTTACTCACTTCACAACAGGATGTTAGGTCTGCAGAAAGAATCTCGGATGCAGCTCTTGAATCTGCGATTTTGCAATTTATCCCTTGCATCCGTTCTGGTAGTTTTGCTGACATTGGGCCGCGGAGATACATGGAAGATGAACATATAAGGATAGACGACTTGTCGTCTCACCTTGGATCACTATACAACTTTCCCACACCAAGTGCCTTTTATGGGGTGTTTGATGGTCACGGAGGACCGGAAGCTGCTGCTTACATAAGAAAAAATGTGATAAAATTCTTCTTTGAGGATGTCAGTTTCCCACAGACATCTGAAGTTAATAACGTATTTTTACAAGAGGTAGAGGATTCCCTCAGAAAGGCATTTCTTTTGGCTGACTCAGCTTTGGCTGATGATTGCGGTGTGAATACTTCATCAGGCACCACGGCTCTTACTGCTTTGATATTTGGAAGGCTTCTAATGGTGGCCAATGCTGGCGACTGCCGAGCAGTTCTATGTCGCAAAGGAGAGGCTATTGACATGTCTCAAGATCACAGACCTATTTATCCGGCAGAGCGGAGGCGAGTTGAAGAATTGGGTGGCTTCATAGACGATGGTTATCTTAATGGAGTTTTATCGGTTACTCGAGCACTCGGTGACTGGGACATGAAGTTACCTAAGGGTGCCCCCTCACCTTTGATTGCAGAGCCTGAGTTACGGCAAGTGATTCTAACAGAGGAAGATGAATTCCTCATCATAGGATGTGATGGCATCTGGGATGTGATGTCAAGTCAGCATGCAGTTAGCCTGGTTCGCCGTGGCCTGAGGCGGCATGATGATCCTGAGAAATGTGCCCGGGACCTGGTTATGGAAGCATTGCGCCTCAACACATTTGACAATCTAACGGTGATCATTGTATGCTTCTCTTCCCTTGATCACAGCGAGCCAGAGCCATCGCCACCACGCCTGCGGAATTTGAGATGCTGTAGCCTCTCTGCAGAGGCTCTTTGTAGCTTGAGGAGCTTGTTGGAAGGCAGTGCTAGCAACTGA 1191 0.4752 MVAEAEIVCQQNVGVLDVKYFPNKGSDIHEIADADAISPPSFDRVRASESVSAELLTSQQDVRSAERISDAALESAILQFIPCIRSGSFADIGPRRYMEDEHIRIDDLSSHLGSLYNFPTPSAFYGVFDGHGGPEAAAYIRKNVIKFFFEDVSFPQTSEVNNVFLQEVEDSLRKAFLLADSALADDCGVNTSSGTTALTALIFGRLLMVANAGDCRAVLCRKGEAIDMSQDHRPIYPAERRRVEELGGFIDDGYLNGVLSVTRALGDWDMKLPKGAPSPLIAEPELRQVILTEEDEFLIIGCDGIWDVMSSQHAVSLVRRGLRRHDDPEKCARDLVMEALRLNTFDNLTVIIVCFSSLDHSEPEPSPPRLRNLRCCSLSAEALCSLRSLLEGSASN* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0044 396 SMART PP2C_SIG_2 100 355 IPR001932 -
Apr8g0044 396 Pfam Protein phosphatase 2C 95 347 IPR001932 -
Apr8g0044 396 PANTHER PROTEIN PHOSPHATASE 2C 49-RELATED 1 372 - -
Apr8g0044 396 ProSitePatterns PPM-type phosphatase domain signature. 124 132 IPR000222 GO:0043169
Apr8g0044 396 PANTHER PROTEIN PHOSPHATASE 2C 1 372 IPR015655 GO:0004722|GO:0006470
Apr8g0044 396 Gene3D - 62 361 IPR036457 -
Apr8g0044 396 CDD PP2Cc 84 355 IPR001932 -
Apr8g0044 396 ProSiteProfiles PPM-type phosphatase domain profile. 85 355 IPR001932 -
Apr8g0044 396 SMART PP2C_4 74 353 IPR001932 -
Apr8g0044 396 SUPERFAMILY PP2C-like 79 357 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0044 Apr-Chr8 364449 367198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0044 98 392 PP2C-type Phosphatase Gene Family AT3G62260 70.946 4.29e-155 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0044 K14803 - gmx:100819791 729.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0044 8 364449 367198 Apr8g0044 8 364449 367198 ECH