Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0040 ATGGGTAGAACTCTCCACATGCATGTAATGCTCTCAACCTTGGTTCTAATTATCTCAGTTTCACCATTGGCATCAGCATCATTGAAGGTGAATTTCTATAAAACTTCATGTCCATCTGCTGAGGAAATAGTGAGAAGAGCTGTAAACAAAGCCGTTTCTCTCAACCCGGGAATTGCTGCTGGCCTAATCAGAATGCATTTTCACGATTGTTTTGTGAGGGGCTGCGATGGATCTGTGCTACTAGAATCCACACCGGGTAACCCATCTGAGAGAGACCACCCTGCCAACAACCCAAGCTTACGAGGCTTCGAGGTAATCGATGAGGCCAAGGCCCAAATAGAAGCTGCATGTCCTAACATAGTGTCGTGTGCAGACATTCTTGCTTTTGCTGCACGAGACAGTGCTCGCAAAGTTGGGGGAATAAACTACGTAGTACCAGGTGGACGCAGAGATGGTCGTGTCTCCATCAGTGATGAAGTGACACAAAATCTACCCCCACCAACCTTCAACTCTGAACAACTTATCAGTAACTTTGCACGAAAGGGGTTATCAACAGATGAAATGGTGACACTTTCTGGGGCACATTCTGTTGGTGTATCACATTGTTCTTCCTTCTCTAAACGCTTGTACTCTTTCAATGCAACCTTTTCTCAAGATCCATCTATGGACCCTAAGTATGCTACGTTGTTGAAAGCCAAGTGTCCACCAAGGAGCAATGGTGACGACACGACTGACCCAACAGTGGTGGTGCTTGATGCTTCCACGCCAAATCGTTTGGACAACAAGTACTACACGGGGCTGAAGAACCATCGTGGTTTATTGACCTCAGATCAAACGTTGGTGAGTAGTGGGTCAACGAGGCAAATGGTGCTAAGCAATGCTAAAGATGGTTCAACTTGGGCAGTGAAGTTTGCTAAGGCAATGGTACACATGGGTTCCATTGACGTGCTAACAGGCTCACAGGGCGAGATCAGGAGGCGTTGCAGTGTCGTTAACTAA 999 0.4665 MGRTLHMHVMLSTLVLIISVSPLASASLKVNFYKTSCPSAEEIVRRAVNKAVSLNPGIAAGLIRMHFHDCFVRGCDGSVLLESTPGNPSERDHPANNPSLRGFEVIDEAKAQIEAACPNIVSCADILAFAARDSARKVGGINYVVPGGRRDGRVSISDEVTQNLPPPTFNSEQLISNFARKGLSTDEMVTLSGAHSVGVSHCSSFSKRLYSFNATFSQDPSMDPKYATLLKAKCPPRSNGDDTTDPTVVVLDASTPNRLDNKYYTGLKNHRGLLTSDQTLVSSGSTRQMVLSNAKDGSTWAVKFAKAMVHMGSIDVLTGSQGEIRRRCSVVN* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0040 332 PANTHER PEROXIDASE 25-RELATED 20 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr8g0040 332 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr8g0040 332 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr8g0040 332 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr8g0040 332 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr8g0040 332 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr8g0040 332 PANTHER PEROXIDASE 20 330 - -
Apr8g0040 332 SUPERFAMILY Heme-dependent peroxidases 28 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr8g0040 332 Pfam Peroxidase 44 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr8g0040 332 Gene3D Peroxidase, domain 2 165 311 - -
Apr8g0040 332 Gene3D - 31 332 - -
Apr8g0040 332 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr8g0040 332 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr8g0040 332 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr8g0040 332 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr8g0040 332 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr8g0040 332 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr8g0040 332 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr8g0040 332 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr8g0040 332 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr8g0040 332 ProSiteProfiles Plant heme peroxidase family profile. 27 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr8g0040 332 CDD secretory_peroxidase 28 331 IPR033905 GO:0004601|GO:0042744
Apr8g0040 332 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Apr8g0040 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0040 Apr-Chr8 349853 350969 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0040 7 332 Peroxidase AT1G05260 47.289 1.27e-95 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0040 K00430 - gmx:100813563 528.094