Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0037 ATGGAAGCTAGATTGGGTGCGGAGGCTTATCATTTTTATGGTGTGGGTGCTGCTTCCTCGGATTTGAGGGGTGTGGCGAAGAGGTCGTCGGAGTGGGATTTGAATGATTGGAGATGGGATGGCGATCTTTTCATAGCTAGCCGCCTGAATCCGGTGCCAGTAGATGGTGTGGGAGCGGGGCAACAATTTTTCCCTGTTGGGTCCGGGATCCCGGGAGGTCTGTCTAACAGTTCTTCTTCGTGCTCTGAGGAAGTAGATCTTGGGGATCCCAAGGGGAACAAGGAAGGGGACAAGAAAAGGAGAGTTATTGTGCTGGAGGATGATGGTTTGAATGAGGAAACGGGCACCCTTAGCTTAAAGCTTGGTGGGCATGCTTCTTCGATGGTGGATAGGGAAATTGCGAGCTGGGAGGGTATGAATGGAAAGAAGAGTAGAGTGGCTGGAAGTACTTCAAATCGAGCTGTTTGTCAGGTGGAGGATTGTGGTGCTGATCTGAGCAAAGCTAAGGATTATCACAGACGTCATAAAGTTTGTGAGATGCACTCCAAGGCTAGTAGGGCACTTGTGGGAAATGCAATGCAGAGATTCTGTCAACAATGTAGTAGGTTTCACATGCTTCAAGAGTTTGATGAAGGAAAGAGAAGCTGTCGAAGACGCTTGGCAGGCCATAATAAACGAAGAAGGAAAACAAATCATGAAGCTGTTCCAAATGGAAATTCGTTAAATGATGACCAGACTAGTAGTTATCTATTGATAAGTTTATTGAAGATACTTTCAAATATGCATTCTGACAGGTCAGATCAGACCACAGATCAGGATCTACTAACTCATCTTCTAAGGAGTCTTGCAAGTCAGAATGGTGAACAAGGTGGCAAAAACATGTCTAACCTTTTGCAGGAACAAGAGAATTTGTTGAGAGAAGGGGGTTCATCAAGGAGATCAGAGATGGTGTCAACTCTATTATCCAATGGTTCTCAAGGCTCCCCAACTATTACAAGACAAAATGAAACTGTATCTATGACTAAAATGCAACAAAAAGTGATGCAGCCACGTGATGCTGGGGCTGCTGATCTGCAGATCATGTCTTCTATAAAGCCAAGCATTTCAAACAGTCCTCCATCCTACTCAGAAGCCAGAGACAGTACTGCTGGACAGATCAAGATGAATAATTTTGATTTGAATGACATATATATTGACTCAGATGATGGCATGGAAGATCTAGAAAGATTACCCATCTCTACAAATCTTGTGACTAGCTCTCTTGATTACCAATGGACACAACAAGATTCTCATCAGTCAAGTCCACCTCAAACGAGTGGAAATTCAGATTCTGCATCTGCCCAGTCTCCTTCTAGTTCGAGTGGAGAAGCTCAGAGTCGCACAGATCGAATTGTTTTTAAGCTCTTTGGCAAAGAGCCTAATGATTTTCCTCTTGTACTTAGAGCACAGATTCTTGACTGGCTGTCCCACAGTCCTACCGATATTGAGAGCTACATACGGCCTGGTTGTATTGTTTTGACCATTTATCTGCGTCAGGCTGAGGCTGTATGGGAGGAACTTTGTTATGGTCTGACTTCCAGTTTGAATAGGCTGCTGGATGTCTCAGGTGATACCTTTTGGAGAACTGGATGGGTTCACATCAGGGTGCAGCATCAGATGGCCTTCATTTTCAATGGTCAAGTTGTCATAGACACTTCCCTCAGAAGTAGCAATTATAGCAAAATTTTGACTGTTAGTCCAATTGCTGTGCCATCATCAAAGAAAGCTCAATTTTCTGTTAAGGGTGTCAATCTGATACGCCCTGCCACTAGGTTAATGTGTGCTTTAGAAGGGAAATATCTGGTCTGTGAAGATGCTCATGAGTCAACGGATCAATACTCCAAGGAGCCTGATGAAGTTCAGTGCATCCAGTTTTCATGTTCTGTCCCTGTGATGAATGGAAGAGGATTTATTGAGATCGAGGACCAGGGTTTGAGTAGCAGCTTTTTTCCTTTCTTAGTTGCGGAGGAGGATGTTTGCTCCGAAATTTGTGCACTTGAGCCTCTTCTAGAATTAAGTGATACTGTTCCAGATATTGAAAAGACTGGAAAAATCAAAGCCAAAAATCAAGCCATGGATTTTATTCATGAAATGGGTTGGCTTCTTCACAGAAGCCAGCTGAAATTAAGGATGGTTCACTCGAACTCTAGTGTAGATCACTTTCCATTAAAACGGTTCAAGTGGCTTATGGAGTTCTCTATGGACCATGATTGGTGTGCAGTAGTTAAAAAACTGTTGAACCTGCTGCTTGATGGAACTGTGAATACAGGGGATCATCCTTCTCTGCATCTTGCGCTTTTAGAAATGGGTCTCCTTCACAGAGCTGTAAGGAGAAATAGCAAGCAGTTAGTGGAGCTACTTTTGAGATATGTCCCTGAGAATATTTCTGATAAACCGGGACCTGAAGACAAGGCTCTAGTTGATGGAGAGAATCAAACCTTCTTGTTTAGACCTGATGTTGTTGGTCCTGCTGGTCTGACACCACTCCATATAGCAGCTGGGAAAGATGGTTCTGAAGATGTACTTGATGCTTTAACTGATGATCCTTGCACGGTGGGAATTGAAGCATGGAAGAATGCTCGTGACAGCACAGGCTCAACGCCTGAGGATTATGCACGTTTACGTGGCCATTATTCTTACATTCACTTGGTGCAGAAAAAAATCAACAAGAGACAAGGAGCAGCTCACGTGGTGGTTGAGATTCCAAGCAATCTAACAGAGAACAATACAAACCAGAAGCACAATGAGTCATCCACTAGCTTTGAGATTGGAAAGTCTGAAGTAAGACATGGCCAAGGGCACTGTAAACTTTGTGATTATAAATTTTCTTGTAAAACTGCAGTAGGAAGGTCTTTGGTATACAGACCTGCAATGCTCTCAATGGTGGCCATAGCAGCAGTTTGTGTCTGTGTGGCCCTTCTGTTTAAAAGCTCACCCGAAGTTATATGTATGTTCCGACCCTTCAGGTGGGAATCGTTGGATTTCGGAACAAGCTAA 3036 0.4364 MEARLGAEAYHFYGVGAASSDLRGVAKRSSEWDLNDWRWDGDLFIASRLNPVPVDGVGAGQQFFPVGSGIPGGLSNSSSSCSEEVDLGDPKGNKEGDKKRRVIVLEDDGLNEETGTLSLKLGGHASSMVDREIASWEGMNGKKSRVAGSTSNRAVCQVEDCGADLSKAKDYHRRHKVCEMHSKASRALVGNAMQRFCQQCSRFHMLQEFDEGKRSCRRRLAGHNKRRRKTNHEAVPNGNSLNDDQTSSYLLISLLKILSNMHSDRSDQTTDQDLLTHLLRSLASQNGEQGGKNMSNLLQEQENLLREGGSSRRSEMVSTLLSNGSQGSPTITRQNETVSMTKMQQKVMQPRDAGAADLQIMSSIKPSISNSPPSYSEARDSTAGQIKMNNFDLNDIYIDSDDGMEDLERLPISTNLVTSSLDYQWTQQDSHQSSPPQTSGNSDSASAQSPSSSSGEAQSRTDRIVFKLFGKEPNDFPLVLRAQILDWLSHSPTDIESYIRPGCIVLTIYLRQAEAVWEELCYGLTSSLNRLLDVSGDTFWRTGWVHIRVQHQMAFIFNGQVVIDTSLRSSNYSKILTVSPIAVPSSKKAQFSVKGVNLIRPATRLMCALEGKYLVCEDAHESTDQYSKEPDEVQCIQFSCSVPVMNGRGFIEIEDQGLSSSFFPFLVAEEDVCSEICALEPLLELSDTVPDIEKTGKIKAKNQAMDFIHEMGWLLHRSQLKLRMVHSNSSVDHFPLKRFKWLMEFSMDHDWCAVVKKLLNLLLDGTVNTGDHPSLHLALLEMGLLHRAVRRNSKQLVELLLRYVPENISDKPGPEDKALVDGENQTFLFRPDVVGPAGLTPLHIAAGKDGSEDVLDALTDDPCTVGIEAWKNARDSTGSTPEDYARLRGHYSYIHLVQKKINKRQGAAHVVVEIPSNLTENNTNQKHNESSTSFEIGKSEVRHGQGHCKLCDYKFSCKTAVGRSLVYRPAMLSMVAIAAVCVCVALLFKSSPEVICMFRPFRWESLDFGTS* 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0037 1011 MobiDBLite consensus disorder prediction 312 332 - -
Apr8g0037 1011 Pfam SBP domain 156 229 IPR004333 GO:0003677
Apr8g0037 1011 MobiDBLite consensus disorder prediction 221 242 - -
Apr8g0037 1011 MobiDBLite consensus disorder prediction 74 96 - -
Apr8g0037 1011 Gene3D - 754 914 IPR036770 -
Apr8g0037 1011 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED 19 1010 - -
Apr8g0037 1011 MobiDBLite consensus disorder prediction 305 332 - -
Apr8g0037 1011 MobiDBLite consensus disorder prediction 364 383 - -
Apr8g0037 1011 MobiDBLite consensus disorder prediction 425 459 - -
Apr8g0037 1011 SUPERFAMILY SBT domain 154 234 IPR036893 GO:0003677|GO:0005634
Apr8g0037 1011 SUPERFAMILY Ankyrin repeat 774 897 IPR036770 -
Apr8g0037 1011 ProSiteProfiles Zinc finger SBP-type profile. 153 230 IPR004333 GO:0003677
Apr8g0037 1011 Gene3D - 147 217 IPR036893 GO:0003677|GO:0005634
Apr8g0037 1011 SMART ANK_2a 837 867 IPR002110 GO:0005515
Apr8g0037 1011 SMART ANK_2a 780 810 IPR002110 GO:0005515
Apr8g0037 1011 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 19 1010 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0037 Apr-Chr8 330412 339375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0037 1 1011 SBP-box Gene Family AT3G60030 54.272 0.0 961
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Apr8g0037 SBP 2.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0037 - - gmx:100809806 1746.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0037 8 330412 339375 Apr8g0037 8 330412 339375 ECH