Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0036 ATGAGTTGTTTCAGCTGTTGCGAAGAGGATGACTTTCATAAGGCTGCCGAAAGTGGAGGACAATATGTTCCCATTGAAGTTCCTGATATAGCAGCAGATGAACTAAAAGAAGTAACCGATAATTTTGGTCAAGATTCTCTGATTGGAGAGGGATCCTATGGAAGAGTATATTATGGTGTTCTTAAAAGTGGGCAAGCTGCAGCAATCAAGAAGTTAGATGCCAGTAAACAGCCTGATGAGGAATTTTTAGCACAGGTTTCAATGGTATCAAGGCTGAAGCATGAAAATTTTGTTCAATTACTTGGATATTGCATTGATGGAAGCTCCCGTATTCTTGCTTATGAGTTTGCATCTAATGGGTCTCTTCATGATATTTTGCATGGCAGAAAAGGTGTTAAGGGAGCACAGCCTGGTCCAGTTTTGACATGGGCACAGAGAGTAAAAATTGCTGTAGGGGCTGCAAGAGGACTTGAATACTTGCATGAGAAGGCTGATCCCCATATTATCCACCGAGACATCAAGTCAAGCAATGTGCTAATCTTTGATGATGATGTTGCTAAAATTGCAGACTTTGATTTATCAAATCAGGCTCCAGATATGGCTGCACGTCTTCATTCTACTCGTGTCCTTGGAACCTTTGGTTATCATGCACCAGAATATGCAATGACTGGACAATTGAATGCTAAGAGTGATGTATACAGTTTTGGTGTTGTCCTTCTGGAACTTCTGACTGGAAGGAAACCCGTTGATCATACACTACCACGTGGACAGCAGAGTCTAGTTACTTGGGCTACACCAAAACTCAGCGAGGATAAAGTCAGGCAGTGTGTTGATGCAAGACTAGGAGGAGAATATCCACCCAAAGCTGTTGCTAAGATGGCTGCTGTTGCTGCACTGTGTGTGCAATACGAAGCTGATTTCAGACCAAACATGAGCATTGTAGTCAAAGCTCTTCAACCTTTGTTGACTGCACGACCTGGACCTGCTGGTGAAACACCAAATTAA 1005 0.4259 MSCFSCCEEDDFHKAAESGGQYVPIEVPDIAADELKEVTDNFGQDSLIGEGSYGRVYYGVLKSGQAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCIDGSSRILAYEFASNGSLHDILHGRKGVKGAQPGPVLTWAQRVKIAVGAARGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGEYPPKAVAKMAAVAALCVQYEADFRPNMSIVVKALQPLLTARPGPAGETPN* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0036 334 Gene3D Phosphorylase Kinase; domain 1 8 116 - -
Apr8g0036 334 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 23 332 - -
Apr8g0036 334 SMART serkin_6 42 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0036 334 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Apr8g0036 334 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 23 332 - -
Apr8g0036 334 SUPERFAMILY Protein kinase-like (PK-like) 26 318 IPR011009 -
Apr8g0036 334 Gene3D Transferase(Phosphotransferase) domain 1 117 326 - -
Apr8g0036 334 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524
Apr8g0036 334 Pfam Protein tyrosine and serine/threonine kinase 46 318 IPR001245 GO:0004672|GO:0006468
Apr8g0036 334 ProSiteProfiles Protein kinase domain profile. 42 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr8g0036 334 CDD STKc_IRAK 48 321 - -
Apr8g0036 334 PIRSF ILK 21 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0036 Apr-Chr8 320890 324683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0036 30 319 Receptor kinase-like Gene Family AT4G02010 51.361 1.64e-92 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Apr8g0036 PK_Tyr_Ser-Thr 9.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0036 K13436 - gmx:100817460 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0036 8 320890 324683 Apr8g0036 8 320890 324683 ECH
Apr4g0582 4 4834185 4837783 Apr8g0036 8 320890 324683 PCT