Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0033 ATGAATGGCAAAATTCTTGGCTCCGCGGTTTCTCTCATCCTCGTTGTAGGTGTTGTCATTGGCGTAGTTGCTGTTGTCCAAAGCCCAAAAGGGAACAGCAACAATGGTGGTGGTGGATCAGGGTTGAGTAACCACAACAGGGCTGTAGCATCATTGTGCCAAAACTCCGATGACCAGAAACTCTGCCACGATGTTCTGTCCCCTGTGAACTCCACCGACCCAAAGGACTACATAGCAACCGTGGTGAAAACCTCCATGGACAGCGTCATTAAAGCCTTCAACATGAGCGACCAGCTCACAGTGGAGCATGGCAACAAAAGCACCGGCGTGAAGATGGCCCTTGACGATTGCAAAGACTTGTTACAATCCGCAATCCAAGAGCTCGACGCTTCGGGTGTTTTCGTCCAACAAAGCAGCATTCAGGACGTGAACACACGCGCCGCCGAACTCAAGAACTGGTTGGGAGCTGTGGTTGCTTACCAACAATCTTGCTTGGATGGGTTCAACACCGACGGTGAGAAGCAAGTGCAAGAGCAGTTGCAAACCGGAAGCTTGGACAACGTTGAAAAACTCACTGGCTTGGCACTTGATATCGTGTCTGGAATTGCACACATTCTCTCTGCCTTTGACCTTAACTTGGCTCTGAAACCCGCTTCTCGTCGCCTTCTCGAGGTTGATCATGAGGGTTACCCCACGTGGCTTTCCTCTGCTGATCGTAAGCTTTTGGGTAAGCTCGACGAACCTAACCAGGGTGGAATTCTTCCCCATGCTATAGTGGCTCAAGATGGAAGTGGCCAATTTAAAACTATTTTGGATGCTATTAATTCTTACCCTAAGAAGCACCAAGGTAGGTTCCTCATCTACGTTAAGGCTGGTATCTATGATGAGTACATCCTCGTTGACAAGAAGAAGCCCAACATTCTCTTGTACGGTGATGGCCCAACCAAGACCATCATCACCGGAAACAAAAACTTCAATGCCGGTGTAAAGACAATAAGAACCGCCACCTTCTCTACTGCTGCTGATGATTTCATTGCCAAGTCAATTGCATTCGAGAATACCGCTGGTTGGGAGGGACATCAAGCAGTGGCACTACGTGTCCAAGGTGATCGTTCAGCATTCTTTGATTGCGCACTCAGAGGTTATCAAGATACATTGTACGCACATGCCCACCGTCAGTTTTACCGCAACTGCGAGATCTCAGGAACAATCGATTTCATCTTCGGCTATTCCTCAACCTTGATCCAGAACTCCAAGATCCTAGTGAGGAAGCCTGGCCCAAACCAACAGAACATTGTGGTGGCTGATGGCACTGGCCAGAAGAGCATGCCCACCGGAATAGTCCTTCAGAACTGCCAGATCATGGCCGATGCTGAACTCGTCGCTGACCGCTTGACCGTGAAGTCTTACTTGGCAAGGCCATGGAAGGCGTTTTCAAGGGCAGTGTTCATTGAGAATGATATTGGTGACTTGATTCAACCTGATGGTTACATTCCATGGAACACCGTTGAACCAAACACTGAGAACTGTTACTTCGCTGAGTTTGGCAACACTGGACCTGGTTCTGTTGTTAAAGCTAGGGCACCTTTTGCCAAAGGTCTTATTAGCAAAGAGGAAGCTACTCAATTCACTGCTGAAAATTGGCTCCAAGCTAGCACTTGGTTGCCTGCCGCTGGCATTCCTTTTGATGCTAGTTTCACCAAGGCTTAA 1710 0.486 MNGKILGSAVSLILVVGVVIGVVAVVQSPKGNSNNGGGGSGLSNHNRAVASLCQNSDDQKLCHDVLSPVNSTDPKDYIATVVKTSMDSVIKAFNMSDQLTVEHGNKSTGVKMALDDCKDLLQSAIQELDASGVFVQQSSIQDVNTRAAELKNWLGAVVAYQQSCLDGFNTDGEKQVQEQLQTGSLDNVEKLTGLALDIVSGIAHILSAFDLNLALKPASRRLLEVDHEGYPTWLSSADRKLLGKLDEPNQGGILPHAIVAQDGSGQFKTILDAINSYPKKHQGRFLIYVKAGIYDEYILVDKKKPNILLYGDGPTKTIITGNKNFNAGVKTIRTATFSTAADDFIAKSIAFENTAGWEGHQAVALRVQGDRSAFFDCALRGYQDTLYAHAHRQFYRNCEISGTIDFIFGYSSTLIQNSKILVRKPGPNQQNIVVADGTGQKSMPTGIVLQNCQIMADAELVADRLTVKSYLARPWKAFSRAVFIENDIGDLIQPDGYIPWNTVEPNTENCYFAEFGNTGPGSVVKARAPFAKGLISKEEATQFTAENWLQASTWLPAAGIPFDASFTKA* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0033 569 SMART PMEI_2 44 198 IPR006501 GO:0004857
Apr8g0033 569 PANTHER PECTINESTERASE 4 566 - -
Apr8g0033 569 SUPERFAMILY Pectin lyase-like 257 563 IPR011050 -
Apr8g0033 569 Pfam Pectinesterase 257 551 IPR000070 GO:0030599|GO:0042545
Apr8g0033 569 TIGRFAM PME_inhib: pectinesterase inhibitor domain 20 199 IPR006501 GO:0004857
Apr8g0033 569 Pfam Plant invertase/pectin methylesterase inhibitor 48 198 IPR006501 GO:0004857
Apr8g0033 569 PANTHER PECTINESTERASE 4 566 - -
Apr8g0033 569 Gene3D - 252 566 IPR012334 -
Apr8g0033 569 CDD PMEI-like_3 51 203 - -
Apr8g0033 569 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
Apr8g0033 569 Gene3D Invertase/pectin methylesterase inhibitor family protein 44 202 IPR035513 -
Apr8g0033 569 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 48 200 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0033 Apr-Chr8 308093 309909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0033 3 561 Carbohydrate Esterase AT3G62170 40.816 9.82e-139 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0033 K01051 - gmx:100808559 913.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0033 8 308093 309909 Apr4g0590 4 4886026 4887880 PCT