Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0031 ATGGGTGTGGAGAAGGAGGAAGGTGACAAACATGACGAGGGAACTGTGTCAGAGAATCATGCAGAAAGCAGCACAAATGGGGAAAAGGCAGAAAAGAGCAAACAGAAAGAAAAACCTGAGACAGTTCCATTTCACAAGCTGTTCACCTTTGCAGACTCCACTGACATTCTGTTGATGACAGTTGGGACCATTGGTGCCATTGGAAATGGTTTGGGTTTGCCTCTCATGACGTTACTGTTCGGTCAAATGATTGATAGCTTCGGTAGTAACCAACGAAACCCGGATGTAGTGAAACAAGTGTCCAAGGTTTCCTTGAAATTTGTATACTTGGCTGTAGGATGTGGGGTGGCAGCATTCCTACAGGTGACTAGCTGGATGGTCACAGGAGAAAGACAGGCTGCACGAATAAGGGGATTGTATTTGAAAACTATTCTAAGACAAGATGTTGCTTTCTTTGATAAGGAAACAAACACAGGAGAGGTTGTAGGGAGGATGTCTGGTGATACGGTTCTTATACAAGATGCCATGGGTGAGAAGGTTGGGAAATTTTTGCAGCTAATTTCAACATTCTTTGGGGGATTTGTGATAGCATTTGTTAAAGGGTGGCTTCTTACAGTTGTCATGTTGTCCACTCTTCCACTTCTTGCTATTTCAGGTGCTGCTATGGCTTTCATCATTAGCAAGATGGCTACTCGAGGTCAAACTGCTTATGCGAAAGCTGCTCATGTAGTTGAACAGACAATTGGCTCAATAAGGACTGTTGCATCCTTCACCGGTGAAAAGCAAGCAGTATCTAGTTATAGCAAATTTCTTGTAGATGCTTACAGATCAGGAATTCATGAAGGTTCCATAGCTGGATTGGGTCTAGGCACAGTTATGTTTGTTATTTTTTGTGGTTATGCTTTGGCTGTATGGTTTGGAGCAAAGATGATAATGGAGAAAGGATACAATGGTGGCACTGTAATTAATGTGATTATTGCTGTGTTAACCGCTTCAATGTCTCTCGGCCAAGCATCCCCTAGCATGAGTGCTTTTGCGGCTGGTCAGGCTGCAGCTTACAAAATGTTTGAGACAATTGAAAGGAAGCCAGAGATAGATGCTTATGATCCAAATGGAAAAATATTAGAAGATATACAGGGTGAAATACAGTTAAGGGATGTTTATTTCAGTTATCCAGCCAGACCTGAGGAATTGATATTCAATGGATTCTCTCTTCATATACCCAGTGGTACCACTGCAGCATTAGTTGGACAAAGTGGAAGTGGAAAGTCTACAGTTATCAGCTTGGTAGAGAGATTCTATGATCCACAGGCAGGTGAAGTTCTTATTGATGGTGTTAACTTGAAAGAGTTTCAGCTTAGGTGGATTAGAGGAAAAATTGGCCTTGTGAGCCAGGAGCCAGTGTTGTTTGCATCTAGCATTAAGGATAATATTGCATATGGAAAGGAGGGAGCAACAATTGAAGAGATAAGATCTGCATCTGAACTTGCAAATGCTGCTAAATTCATTGATAAACTTCCACAGGGATTGAACACAATGGTTGGTGAGCACGGTACTCAGTTGTCTGGTGGACAGAAGCAGCGCATTGCCATTGCAAGAGCAATCCTGAAGGATCCTAGAATTTTACTTCTTGATGAAGCTACAAGTGCACTTGATGCAGAGTCTGAAAGGATAGTGCAAGAAGCTCTAGATAGAATCATGGTCAACAGAACTACTGTTATTGTGGCACATCGCTTGAGCACAGTGAGGAATGCTGATATGATTGCTGTAATCCATAAAGGGAAGATGGTTGAGAAAGGAACACACTCAGAATTACTTAAGGATCCTGAGGGAGCTTACACTCAACTTATACGCCTACAAGAAGTAAACAAGGAAGCAGAAGAAATTGCAGACAATCATAAGAGTGAACATTCTGCAGAATCCTTTAGACAATCTAGTCAAAGGAGGTCACTTCAAAGATCTATTAGTAGGGGATCATCCATAGGAAATAGTAGCCGCCACTCATTTTCAGTTTCCTTTGGTTTACCCACTGGAGTTAATGTCCCTGATCATGAACATGAAAACTTACAATCCAAAGAACAAGCACCAGAGGTTCCACTCAGCCGCCTTGCTTCCCTCAACAAGCCAGAGATTCCAGTTCTTCTTATTGGATGTGTGGCTGCAATAGGAAATGGTGTTATACTTCCAATATTTGGTGTTTTGATTTCCAGTGTGATCAAAACATTTTATGAACCGTTTGATGAGATGAAAAAGGACTCCAAGTTTTGGGCATTGATGTTTATGACCCTTGGTCTTGCATCGTTCTTGATAATTCCAGCACGAGCATACTTTTTTTCTGTGGCTGGATGCAAGTTAATCCAACGTATCAGGCTAATATGTTTTGAGAAGGTGGTCAACATGGAGGTTGGTTGGTTTGATGAACCTGAAAACTCAAGTGGCGCTGTTGGTGCAAGGCTCTCAGCTGATGCTGCTTCTGTGCGTGCTCTTGTTGGTGATGCACTGGGACTATTAGTTCAAAATTTAGCATCTGCATTGGCAGGTTTGATTATTGCTTTCGTTGCAAGTTGGGAGCTAGCATTTATTATTCTTGTCTTAATTCCCCTCATTGGAGTAAATGGGTATGTTCAAATGAAATTCATGAAAGGATTCAGTGCAGATGCAAAGATGATGTACGAGGAAGCAAGCCAAGTTGCTAATGATGCAGTTGGAAGTATAAGAACAGTAGCTTCTTTCTGTGCTGAAGATAAGGTTATGGAACTATACAGGAAAAAATGTGAAGGCCCTATGAAAACAGGGATACGACAAGGGTTAATTAGTGGATCAGGATTTGGGGTTTCATTTTTCTTACTGTTTAGTGTCTACGCAACTAGTTTCTATGCAGGAGCTAGACTAGTGGACGCTGGGAAGGCAACATTCTCAGATGTTTTCCGGGTTTTCTTTGCGTTAACTATGGCAGCTATTGGAGTTTCCCAATCAAGCTCCTTTGCTCCTGACTCAAGCAAAGCCAAGTCAGCTACTGCTTCTATATTTGGAATGATTGATAAGAAGTCAAAGATAGACCCAAGTGATGAGTCTGGCACCACATTGGATAGTGTTCAGGGAGAAATTGAGCTTCGTCATGTGAGTTTCAAGTATCCATCTAGGCCTGATATACCGATTTTCCGAGACCTCAGCTTGGTTATTCATTCTGGCAAGACGGTGGCCCTTGTTGGTGAAAGCGGAAGTGGCAAATCCACTGTGATTGCCTTGTTGCAAAGATTTTATGATCCTGATTCAGGGCAAATCACCCTTGATGGGATAGAAATTCGGGAGTTAAAGCTCAAGTGGTTAAGGCAGCAAATGGGTCTTGTAAGCCAAGAGCCAGTATTGTTCAATGACACCATCCGTGCTAACATTGCCTATGGTAAAGGAGGCAATGCAACTGAAGCAGAAATCATAGCTGCAGCAGAATTGGCCAATGCCCACAAGTTCGTTAGTAGCTTACACCAGGGTTATGATACTGTAGTGGGGGAGAGGGGAACACAATTATCTGGTGGGCAAAAGCAACGGGTAGCCATTGCACGAGCGATTATTAAAAGTCCAAAGATATTGCTTCTGGATGAGGCCACTAGTGCATTAGACGCTGAGTCAGAGAGGGTTGTTCAAGATGCACTGGACAAAGTCATGGTGAACAGAACCACTGTGGTTGTGGCCCATCGTCTATCTACAATAAAAAATGCAGATTTGATTGCTGTTGTGAAAAATGGAGTTATAGTGGAGAAAGGAAGGCACGAAACACTCATCAACGTCAATGGTGGATTTTATGCTTCCTTAGTCCAACTCCACACAAGTGCTTCAACAGTATGA 3846 0.4238 MGVEKEEGDKHDEGTVSENHAESSTNGEKAEKSKQKEKPETVPFHKLFTFADSTDILLMTVGTIGAIGNGLGLPLMTLLFGQMIDSFGSNQRNPDVVKQVSKVSLKFVYLAVGCGVAAFLQVTSWMVTGERQAARIRGLYLKTILRQDVAFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLISTFFGGFVIAFVKGWLLTVVMLSTLPLLAISGAAMAFIISKMATRGQTAYAKAAHVVEQTIGSIRTVASFTGEKQAVSSYSKFLVDAYRSGIHEGSIAGLGLGTVMFVIFCGYALAVWFGAKMIMEKGYNGGTVINVIIAVLTASMSLGQASPSMSAFAAGQAAAYKMFETIERKPEIDAYDPNGKILEDIQGEIQLRDVYFSYPARPEELIFNGFSLHIPSGTTAALVGQSGSGKSTVISLVERFYDPQAGEVLIDGVNLKEFQLRWIRGKIGLVSQEPVLFASSIKDNIAYGKEGATIEEIRSASELANAAKFIDKLPQGLNTMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHKGKMVEKGTHSELLKDPEGAYTQLIRLQEVNKEAEEIADNHKSEHSAESFRQSSQRRSLQRSISRGSSIGNSSRHSFSVSFGLPTGVNVPDHEHENLQSKEQAPEVPLSRLASLNKPEIPVLLIGCVAAIGNGVILPIFGVLISSVIKTFYEPFDEMKKDSKFWALMFMTLGLASFLIIPARAYFFSVAGCKLIQRIRLICFEKVVNMEVGWFDEPENSSGAVGARLSADAASVRALVGDALGLLVQNLASALAGLIIAFVASWELAFIILVLIPLIGVNGYVQMKFMKGFSADAKMMYEEASQVANDAVGSIRTVASFCAEDKVMELYRKKCEGPMKTGIRQGLISGSGFGVSFFLLFSVYATSFYAGARLVDAGKATFSDVFRVFFALTMAAIGVSQSSSFAPDSSKAKSATASIFGMIDKKSKIDPSDESGTTLDSVQGEIELRHVSFKYPSRPDIPIFRDLSLVIHSGKTVALVGESGSGKSTVIALLQRFYDPDSGQITLDGIEIRELKLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGNATEAEIIAAAELANAHKFVSSLHQGYDTVVGERGTQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDKVMVNRTTVVVAHRLSTIKNADLIAVVKNGVIVEKGRHETLINVNGGFYASLVQLHTSASTV* 1282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0031 1281 MobiDBLite consensus disorder prediction 627 643 - -
Apr8g0031 1281 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1036 1273 IPR003439 GO:0005524
Apr8g0031 1281 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 19 1277 - -
Apr8g0031 1281 MobiDBLite consensus disorder prediction 627 667 - -
Apr8g0031 1281 PANTHER - 19 1277 - -
Apr8g0031 1281 ProSitePatterns ABC transporters family signature. 521 535 IPR017871 GO:0005524
Apr8g0031 1281 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 61 347 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr8g0031 1281 CDD ABC_MTABC3_MDL1_MDL2 382 620 - -
Apr8g0031 1281 MobiDBLite consensus disorder prediction 644 667 - -
Apr8g0031 1281 SUPERFAMILY ABC transporter transmembrane region 702 1020 IPR036640 GO:0005524|GO:0016021
Apr8g0031 1281 SUPERFAMILY ABC transporter transmembrane region 40 366 IPR036640 GO:0005524|GO:0016021
Apr8g0031 1281 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 371 620 IPR027417 -
Apr8g0031 1281 ProSitePatterns ABC transporters family signature. 1176 1190 IPR017871 GO:0005524
Apr8g0031 1281 SMART AAA_5 409 601 IPR003593 -
Apr8g0031 1281 SMART AAA_5 1063 1256 IPR003593 -
Apr8g0031 1281 Coils Coil 616 636 - -
Apr8g0031 1281 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 715 1001 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr8g0031 1281 CDD ABC_MTABC3_MDL1_MDL2 1036 1274 - -
Apr8g0031 1281 Gene3D - 380 633 IPR027417 -
Apr8g0031 1281 Gene3D ABC transporter type 1, transmembrane domain 105 1010 IPR036640 GO:0005524|GO:0016021
Apr8g0031 1281 Gene3D - 1026 1280 IPR027417 -
Apr8g0031 1281 Pfam ABC transporter transmembrane region 60 333 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr8g0031 1281 Pfam ABC transporter transmembrane region 714 986 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr8g0031 1281 CDD ABC_6TM_Pgp_ABCB1_D1_like 59 343 - -
Apr8g0031 1281 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1026 1273 IPR027417 -
Apr8g0031 1281 CDD ABC_6TM_Pgp_ABCB1_D2_like 704 1019 - -
Apr8g0031 1281 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 382 618 IPR003439 GO:0005524
Apr8g0031 1281 MobiDBLite consensus disorder prediction 1 39 - -
Apr8g0031 1281 Pfam ABC transporter 401 549 IPR003439 GO:0005524
Apr8g0031 1281 Pfam ABC transporter 1055 1204 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0031 Apr-Chr8 284428 291143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0031 35 1275 Calmodulin-binding Proteins AT2G36910 45.491 0.0 1073
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0031 K05658 - gmx:100800034 2200.25