Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0024 ATGAAAGACCACCACAAAATGCAACACCGCCACCACCGTGAATTGACCTTGCTAAGCTCCACCGACTTCCCCCGCCAGAATCTCAGTCTAGATCCCATAATCGTCACCCCCAAAGACCATAGCGATCCTTCCATCAAAGAAATGGATTTCTTCTCAGATTCACCGCCCAGGTATAGTGATACTAAAAACAATATTAACCAGCACCAGCACCATCATCAACGTCACCCCAACATCTCTCAAGATGGATCACAAACTCTTCTCACCGATCACTTCGTAAACACTGCGTTGAATTTAAAGTGTGCAAGTGCTGAAAGAACTGCAAATGATGAAAGTTCAAAAGCCGTGGTTCGTATGGCTTGTCCTGATCCAACAGAAGATGTTGTTGACCAATCGTCCTCACAGAGTTGGGGATCATCCAAGAGTCCCAAGTTAGAAGAATCCAAAATCGAACTTCCTTTCAAAAAGGCCAAGGTTTCCGTGCGTGCAAGATCAGAAGCTCCGCTGATTAACGATGGATGTCAGTGGAGAAAATATGGGCAGAAAATGGCCAAAGGTAACCCTTGTCCCCGTGCCTACTATCGTTGCACTATGGCTGTAGGATGCCCGGTTCGAAAACAGGTGCAAAGATGTGCAGAGGACAAGACAGTGCTTATAACAACCTACGAAGGGAATCATAGCCACCCTCTCCCACCATCAGCCACAGCCATGGCCAATTCTACATCAGCTGCTGCGTCAATGCTTCTGTCAAGTTCAGGTTCAACAAGCAGCAATGAAACGTTAAATAACAGTGCAGGACTCTTCTCTTCAACACCCTACATCTCCATGGCAACCTTGTCAGCCTCTGCACCATTCCCCACTATCACTCTCGACATGACCCATATTCCCAATAATCCCATGCAACTACCTCTACCGTTGCATGTTGCTTCTTTTCCTCAATTACTGGGACACCCTGTGATCTTCCCCCAGAAGCTATCACATCCAGCTATGACTCTTGCTCAACTAGCCCAACAACGACTGCCTTCATCCATGACCCAGACAGTGAGCGCAGCCATTGCTTCAGATCCAAACTTCACTACTGCCCTAGCAACTGCCATCTCATCATTCATTGGATCACACCCAGGCAGTGATGCAAATAGTAACAACACTGGAAATGCTAATTCTCTTCATGGGCCATTTCTGTTCCCCAATTCCACAGTCACCAATTAA 1206 0.4685 MKDHHKMQHRHHRELTLLSSTDFPRQNLSLDPIIVTPKDHSDPSIKEMDFFSDSPPRYSDTKNNINQHQHHHQRHPNISQDGSQTLLTDHFVNTALNLKCASAERTANDESSKAVVRMACPDPTEDVVDQSSSQSWGSSKSPKLEESKIELPFKKAKVSVRARSEAPLINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTVLITTYEGNHSHPLPPSATAMANSTSAAASMLLSSSGSTSSNETLNNSAGLFSSTPYISMATLSASAPFPTITLDMTHIPNNPMQLPLPLHVASFPQLLGHPVIFPQKLSHPAMTLAQLAQQRLPSSMTQTVSAAIASDPNFTTALATAISSFIGSHPGSDANSNNTGNANSLHGPFLFPNSTVTN* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0024 401 MobiDBLite consensus disorder prediction 53 82 - -
Apr8g0024 401 Pfam WRKY DNA -binding domain 170 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr8g0024 401 Gene3D WRKY domain 154 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr8g0024 401 SUPERFAMILY WRKY DNA-binding domain 162 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr8g0024 401 MobiDBLite consensus disorder prediction 126 142 - -
Apr8g0024 401 SMART WRKY_cls 169 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr8g0024 401 ProSiteProfiles WRKY domain profile. 164 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr8g0024 401 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 117 387 IPR044810 GO:0003700
Apr8g0024 401 MobiDBLite consensus disorder prediction 376 401 - -
Apr8g0024 401 PANTHER WRKY TRANSCRIPTION FACTOR 47-RELATED 117 387 - -
Apr8g0024 401 MobiDBLite consensus disorder prediction 123 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0024 Apr-Chr8 242671 246518 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0024 141 369 WRKY Transcription Factor Family AT4G04450 55.242 4.70e-75 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr8g0024 WRKY 6.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0024 - - aprc:113873757 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0600 4 4956759 4962371 Apr8g0024 8 242671 246518 PCT