Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0017 ATGGGTTATCTAATTGGTGTTGCCATGGTGACTAGTGCTGTTTTGATTATATCAAAGATTTGGAAAATCTTTGTGATTCTCTTTTGGAGGCCATATTCCATTACTAGGCACTTTCAAAAGCAAGGAGTCACGGGGCCACCCTACTCCATTCTCTCCGGTTCTCTCCATGAAATCAAAGCAATGATCAAGGATGCAAGAGAACGGATCATAGATACTCACTCACATGAAATTACTCACAGGGTTCTTCCACACTACCAAAAGTGGTCCTCCTTATATGGGAAGACATTTCTATACTGGTTTGGAACAAAACCTACGATTTGCATTGCTGATCCTGAGCTGGCCAAAGAGATGTTGTCAAACAAGTATGGTTTCTATACAAAACCCGAGCCAAGGCCTTCTATAGTAACTATGATAGGAGATGGGTTAGTTCTGGTCGATGGACTGGAATGGGTAAAGCGCAGAAGGATACTCAATCCTGCTTTCTCTATGGATAAACTTAAGGTTATGATAAGTAGGATGGCAGCATGTACCATTTCTATGCTCGACGAGTGGAAAAATCAAGCCATTGAAGCCAAGGGCAAATTCAAGACAATAGAAATGAATGAAGAATTTCATGAGCTAACAGCAGATATAATCGCCCACACTGCCTTCGGTGTTAGCTTTGTCCAAGGAAGGGAAGCCTTTAATGCACAAAGAGAACTTCAAAATCATTGCATAGCTTCAAGTGTAGACATTTTCATTCCTGGCACCCAATACCTCCCTACTCGGTCAAATCTTCAGATATGGAAGCTAGATAGGGAAATGAAGAAATCACTACAATGCATTATAGAAAGTAGATTGCATGATGAATCAGATTGCTCTTATGGAGATGATCTTCTTGGTGCAATGATAGATGCATCAAAAACAAATAATGGCCTTAGATTGAAGATGAATGAAATCGTGGAAGAATGCAAGACCTTTTTCTTTGCTGGTCATGAAACCACTTCAAACTTGCTTACTTGGACAGTGTTCTTGTTGGGTTTACACAAGGAATGGCAAGAGAAACTTAGAGAAGAGGTCTTGCACAACTGTGGCACGGAAATTCCTGATGCAGATATGCTAGCAAAGTTAAAAATGGTGAATATGGTATTGATTGAAGCGTTAAGATTGTATACTCCAGCGTTAGAACTACAAAGAGTGGCTTCTGAAGACATAAAATTGGGAAACTTGTTGGTCCCAAAAGGAACATGTCTTGCAATGCCAATTATAATGATGCACAGGAGCAAAGAATACTGGGGTGAAGATGCAAATGAATTCAATCCACTGAGATTCATAAACGGAGTTTCTAAGGCTGCAAAGCACCCAAATGCTTTACTTGCCTTTGGGCTGGGTCCAAGAAGTTGCATTGGTCAGAATTTTGCTATGCTGGAAGCGAAGACTGTAATTGCTTTGATTCTTCAGAGATTTTCTTTGTCCCTTTCCCCTCACTACAAACATGCACCTGCAAACCACCTCACCTTGCAGCCACAATATGGCCTTCCCATCATTGTAGAACCTTTAAATTTGTAA 1548 0.4057 MGYLIGVAMVTSAVLIISKIWKIFVILFWRPYSITRHFQKQGVTGPPYSILSGSLHEIKAMIKDARERIIDTHSHEITHRVLPHYQKWSSLYGKTFLYWFGTKPTICIADPELAKEMLSNKYGFYTKPEPRPSIVTMIGDGLVLVDGLEWVKRRRILNPAFSMDKLKVMISRMAACTISMLDEWKNQAIEAKGKFKTIEMNEEFHELTADIIAHTAFGVSFVQGREAFNAQRELQNHCIASSVDIFIPGTQYLPTRSNLQIWKLDREMKKSLQCIIESRLHDESDCSYGDDLLGAMIDASKTNNGLRLKMNEIVEECKTFFFAGHETTSNLLTWTVFLLGLHKEWQEKLREEVLHNCGTEIPDADMLAKLKMVNMVLIEALRLYTPALELQRVASEDIKLGNLLVPKGTCLAMPIIMMHRSKEYWGEDANEFNPLRFINGVSKAAKHPNALLAFGLGPRSCIGQNFAMLEAKTVIALILQRFSLSLSPHYKHAPANHLTLQPQYGLPIIVEPLNL* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0017 515 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0017 515 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0017 515 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0017 515 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0017 515 Pfam Cytochrome P450 84 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0017 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Apr8g0017 515 Gene3D Cytochrome P450 28 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0017 515 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0017 515 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0017 515 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0017 515 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0017 515 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0017 515 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0017 515 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 510 - -
Apr8g0017 515 SUPERFAMILY Cytochrome P450 79 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr8g0017 515 PANTHER P450, PUTATIVE-RELATED 5 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0017 Apr-Chr8 199813 203320 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0017 21 513 Cytochrome P450 AT2G46960 54.910 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0017 K20660 - aprc:113872106 1044.26