Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0016 ATGGGAAGACACTCTTGCTGTTACAAGCAGAAGCTTAGAAAGGGTCTTTGGTCACCTGAGGAGGATGAAAAACTTCTGAGGCATATTACCAAGTATGGTCATGGATGTTGGAGTTCTGTGCCTAAGCAAGCAGGTTTGCAGAGGTGTGGTAAGAGCTGTAGGCTTAGGTGGATCAATTACTTAAGGCCTGATTTAAAGAGAGGAACATTCTCACAAGAAGAAGAGAACCTTATCATTGAACTTCATGCAGTATTAGGGAACAGATGGTCTCAAATTGCAGCACAATTGCCGGGGAGGACTGACAATGAAATAAAGAATCTATGGAACTCTTGCTTGAAGAAGAAACTGAGGCAAAAGGGTATAGACCCTGTGACACATAAACCACTGTCCCAGGTTGAGAATGGAGAGGACGATGGTAGGAGCCAAGAGAAAGCACCACAAGTATCCAATGAACTGAACCTACTGAAATCAGAGAGCTCCAAGTCAGATGCAGCTTCCTATGAGCAAAGAACATCATCAATTTCCCCGAAAGCCCACGCACCCGAGATGGATGGTTCTGGTTCTTGCAGCTCCAAGATTTATAGCAAATGTGACAGCAATTTTATGACCAATTGTTACAGCAAAGACTTGTTCCTAGACAGGTTTATGAGTAGCCGCCAGGAAAGCTACCAGCCCTCAGATTTGATGGGGAATTTTCCCATTCAGATGAGTTATGCCACCACTGAGTCTCTTCCAAATGATTCAAACTCTAGTAATTGGTTCAGCCAAACTGGAAGGCCTTTTGATATGAACTCAGAATTTCCTTTCAATGCCACTTCTGTTCTTACCCCTACAACCAACATGTTTCTTCCTAATTCTTTTTGCTACAAACCTTCACTTGCTGTTCCCTCTGACAATGTTTCCACAGCCTATGGATCCCATTATTGGGAAGCCAGTGCCTCCATCAATAGCAATAGCAGCAATAGGAGTAATAGCAGCACAGAGTTGAGAAGTAGCAGCCCCATGAACGTACAGAACAGTATCCTCTCTTCTTGGGGGTTGGCAGATTGTAACACCTCTACTAAAGAGGCCCAAATTCATATGATGGAAAACCATACAGAAGAAGCTAAGTGGGATGAGTACCTTCACATTCACAATCCAATCTCAATGCTGGCTTCTGTACAAAACCAAGCCCCTGAATCTTTATGCAATGAGGTAAAGCCATCCATGCATTTGGTATCTGACACTTTAGGGGCTATATTACCTCATACCAAACAGCAAGAACTGTCACAAACTTCTAGTATCTTTTCTAAGGACATCCATAAGCTCAGGGCAGCTTTTGGACACATGTAG 1332 0.4332 MGRHSCCYKQKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQKGIDPVTHKPLSQVENGEDDGRSQEKAPQVSNELNLLKSESSKSDAASYEQRTSSISPKAHAPEMDGSGSCSSKIYSKCDSNFMTNCYSKDLFLDRFMSSRQESYQPSDLMGNFPIQMSYATTESLPNDSNSSNWFSQTGRPFDMNSEFPFNATSVLTPTTNMFLPNSFCYKPSLAVPSDNVSTAYGSHYWEASASINSNSSNRSNSSTELRSSSPMNVQNSILSSWGLADCNTSTKEAQIHMMENHTEEAKWDEYLHIHNPISMLASVQNQAPESLCNEVKPSMHLVSDTLGAILPHTKQQELSQTSSIFSKDIHKLRAAFGHM* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0016 443 Gene3D - 11 67 - -
Apr8g0016 443 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Apr8g0016 443 PANTHER MYB DOMAIN PROTEIN 55 1 437 - -
Apr8g0016 443 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Apr8g0016 443 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Apr8g0016 443 CDD SANT 17 61 IPR001005 -
Apr8g0016 443 SMART sant 13 63 IPR001005 -
Apr8g0016 443 SMART sant 66 114 IPR001005 -
Apr8g0016 443 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Apr8g0016 443 MobiDBLite consensus disorder prediction 122 187 - -
Apr8g0016 443 Gene3D - 69 143 - -
Apr8g0016 443 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Apr8g0016 443 MobiDBLite consensus disorder prediction 315 335 - -
Apr8g0016 443 CDD SANT 69 109 IPR001005 -
Apr8g0016 443 PANTHER HOMEODOMAIN-RELATED 1 437 - -
Apr8g0016 443 MobiDBLite consensus disorder prediction 145 176 - -
Apr8g0016 443 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Apr8g0016 443 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0016 Apr-Chr8 183992 185766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0016 1 138 MYB Transcription Factor Family AT4G01680 92.029 4.59e-94 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Apr8g0016 Myb_DNA-binding 2.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0016 K09422 - gmx:100815881 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0605 4 5016611 5018795 Apr8g0016 8 183992 185766 PCT