Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0015 ATGAAAACGAAGCTGCTTTTGGTAGCCATTCAATTTGCATGCTTCGTTTCTGCAATTTTCTCCTTTGGATCTGAGACACTGTCCGTACTTTCTTTCATAGAAAAAGATGCCGTCACAGCAAAACCTTTCTCCTCACCTCAACCTCTTATGGTGGATCTCACTCTTGTTGAAGGAGCCGATTCTAAAGGAGCTGTGTGTTTGGATGGAACATTGCCTGGTTACCATTTAGATCGTGGATTTGGATCTGGTGCAAATAGTTGGCTTATTCATTTGGAGGGAGGAGGATGGTGCAACACCATCAGAAACTGTGTCTATCGAAAAAATACTCGTCGTGGCTCCTCTAAATACATGGAAAATCAGATACCATTCACTGGAATATTGAGCAATAAACCAGAAGAAAACCCTGATTTCTTTAATTGGAACAGAGTGAAATTACGGTACTGTGATGGGGCATCTTTCAGTGGAGATAGTGAAAATGAGTCTGCACAGCTTCAATTTCGAGGACAAAAAATATGGTTTGCTGCAATGGAGGATCTGATGTCCAAGGGAATGCAGAAAGCTGACCAGGCCCTTCTCTCCGGATGCTCTGCGGGTGGGCTGGCATCCATAATACATTGTGATGAGTTCCGTAGCTTGTTCCCAAACTCTTCCAAAGTGAAATGTTTGAGTGATGCAGGTTTTTTCCTTGATGCAATTGATGTATCTGGGGGACGCAGCCTGAGGAATCTGTTTGGAGGGGTGGTTCAGTTACAGGAAGTACAAAAAAATCTTCCACAAAGTTGTCTCAACCAACTGGACCCAACTTCGTGCTTCTTTCCTCAGAATATGGTCAAACATATTGAGACGCCATTGTTTCTACTCAACGCAGCTTATGATGTGTGGCAGGTCCAAGCCAGTTTAGCCCCACCTTCAGCTGACCCCCTAGGCTCTTGGAATGACTGCAAATCAAACCATGCAAACTGTAGCTCCTCTCAGCTTCAGTTCCTCCAAGACTTCAGAAATCAAATGCTAAATGACGTGAAAGACTTCTCAAGCTCATCTCAAACTGGACTATTCATAAATTCTTGTTTTGCTCATTGTCAGTCTGAGAGACAAGAGACATGGTTTGCTGATGACTCTCCCCTTCTTGAGGACAAGCCAATAGCAGTTGCTGTTGGAGATTGGTATTTCGATCGGGAAGTTGTCAAAGCTATTGACTGTGCTTACCCGTGTGACAACAGCTGCCATAATCTGGTGTTTAAGTGA 1245 0.4378 MKTKLLLVAIQFACFVSAIFSFGSETLSVLSFIEKDAVTAKPFSSPQPLMVDLTLVEGADSKGAVCLDGTLPGYHLDRGFGSGANSWLIHLEGGGWCNTIRNCVYRKNTRRGSSKYMENQIPFTGILSNKPEENPDFFNWNRVKLRYCDGASFSGDSENESAQLQFRGQKIWFAAMEDLMSKGMQKADQALLSGCSAGGLASIIHCDEFRSLFPNSSKVKCLSDAGFFLDAIDVSGGRSLRNLFGGVVQLQEVQKNLPQSCLNQLDPTSCFFPQNMVKHIETPLFLLNAAYDVWQVQASLAPPSADPLGSWNDCKSNHANCSSSQLQFLQDFRNQMLNDVKDFSSSSQTGLFINSCFAHCQSERQETWFADDSPLLEDKPIAVAVGDWYFDREVVKAIDCAYPCDNSCHNLVFK* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0015 414 Pfam Pectinacetylesterase 46 394 IPR004963 GO:0016787
Apr8g0015 414 PANTHER PECTIN ACETYLESTERASE 3 413 - -
Apr8g0015 414 PANTHER NOTUM-RELATED 3 413 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0015 Apr-Chr8 165799 172516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0015 43 414 Carbohydrate Esterase AT1G57590 71.505 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0015 K19882 - gmx:100786972 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0607 4 5031466 5037180 Apr8g0015 8 165799 172516 PCT