Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0012 ATGGCATCGTCATTCTCAACGCAATTGCTGCAAAGTCAGAACCTACTCCCTCGTTTTCATCATCATATTCAGGGGAATTTCGGCCAAGATGTGTCAAAAGTTCAGAGGCCACGTGTGGTCTTCAGCGGTACCAAATCACAGCTTGGTTACAGCAAAACATTGGCGTCAACATCTCATTATGCTGCCAAATTTTCTGTTTCACCACAATCTGATGCTAAATCAATCACATATAGAAGAATGTCATGTATTAATTCTATGGAAAATGCTCTAGAGGTGCAAGCCAAAGTGACAAACAAGTGTTTCTTTGATGTACAAGTTGGGGGTGAACCTATTGGCAGGATTGTTTTTGGTCTATTTGGAGAGGTTGTTCCCAAAACAGTTGAGAATTTCCGTGCTTTATGCACAGGAGAGAAAGGATATGGCTACAAAGGATGCTACTTCCATCGTATAATCAAAGATTTCATGATTCAGGGAGGGGACTTCACTGAAGGAGATGGAACTGGCGGGATCAGTATCTATGGTGCTAAATTTGAAGATGAAAATTTCGCCTTGAAGCATGTTGGTCCTGGAGTTTTGAGCATGGCAAATGCCGGTCCTAATACCAATGGTAGTCAATTTTTTATTTGCACTGTACAGACTCCATGGTTAGACAATCGTCATGTTGTGTTTGGACATGTAATTGATGGAATGGATGTTGTAAGGACACTTGAATCACAGGAGACTAGCAAGTTTGATAATAGCCCGCGAAAGCCATGCAAAATTGCAAATTCTGGAGAACTGCCTATAGATAATTGA 795 0.4113 MASSFSTQLLQSQNLLPRFHHHIQGNFGQDVSKVQRPRVVFSGTKSQLGYSKTLASTSHYAAKFSVSPQSDAKSITYRRMSCINSMENALEVQAKVTNKCFFDVQVGGEPIGRIVFGLFGEVVPKTVENFRALCTGEKGYGYKGCYFHRIIKDFMIQGGDFTEGDGTGGISIYGAKFEDENFALKHVGPGVLSMANAGPNTNGSQFFICTVQTPWLDNRHVVFGHVIDGMDVVRTLESQETSKFDNSPRKPCKIANSGELPIDN* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0012 264 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 142 159 IPR020892 GO:0003755|GO:0006457
Apr8g0012 264 SUPERFAMILY Cyclophilin-like 92 260 IPR029000 -
Apr8g0012 264 Gene3D - 87 264 IPR029000 -
Apr8g0012 264 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 101 259 IPR002130 GO:0000413|GO:0003755
Apr8g0012 264 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 IPR002130 GO:0000413|GO:0003755
Apr8g0012 264 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 147 159 IPR002130 GO:0000413|GO:0003755
Apr8g0012 264 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 190 205 IPR002130 GO:0000413|GO:0003755
Apr8g0012 264 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 205 217 IPR002130 GO:0000413|GO:0003755
Apr8g0012 264 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 218 233 IPR002130 GO:0000413|GO:0003755
Apr8g0012 264 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP20-3, CHLOROPLASTIC 56 263 - -
Apr8g0012 264 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 102 257 IPR002130 GO:0000413|GO:0003755
Apr8g0012 264 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 56 263 - -
Apr8g0012 264 MobiDBLite consensus disorder prediction 239 264 - -
Apr8g0012 264 CDD cyclophilin_ABH_like 99 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0012 Apr-Chr8 150969 154809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0012 29 249 U-box Gene Family AT5G67530 36.735 6.98e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0012 K03768 - gmx:100526955 452.21