Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0010 ATGGGTAACGGCACTTCTCGTGTTGTTGGCTGTTTGGTGCCATTCAATGGAAAAAGTGGGGTTGATTTGGAGTTTCTAGAGCCATTAGATGAAGGTTTAGGCCATTCCTTCTGTTATGTGAGGCCATCCATTTTTGAATCCCCTGCCATTAGTCCATCAAACTCTGGTAGGTTTACGGTTGATTCCAGTACCCTTGATTCTGAAACCTTGAGTGGATCCTTTAGGCATGATAGCATAGAAGATTCTTCTGGCATGCATAAGTCGGGTAAGAATTTTCCGGAAACCACATTCAAAACGATTTCGGGGGCTTCTGTTAGTGCTAATGTTTCAACTGCGAGGACTGGTAACCAGAGCGCATTGTTTGCCAGTGACGTCCTGGAACCTGCTGCATCATTTGAGGGGACTGCTTCATTTGCTGCAATCCCTTTGCAGCCTGTACCCCGTGGTTCTGGACCCTTGAATGGTTTCATGTCTGGACCTCTGGAGAGAGGTTTTGGCTCAGGTCCATTGGATAGGGGTGGCGGTTTCATGTCTGGGCCAATAGAGAAGGGAGTTATGTCAGGTCCTCTTGATGCCACTGACAAATCCAACTTTTCGGCACCACTTGCACGTGGTCGTCAAAGGCCACGACTGCAACATCTCATGAGAAGTGTAAGTGGACCAATGAAGAACACTCTTTCTCGGACCTTCTCTAAGCATTCCGCGGGTGGCAGTTGGATGCAAAGGTTATTCTTTCATCCAGTGACTCAACTAGCCTGGCATTCCAAAGATCCAAAGTTTCGACCAGAAGTCTCTAGGAGCTGTGTTGAAGTTGAACCACCTGAAGGGGAGTATAAACATATGCACAATTTGCAGTGGGCTCATGGCAAGGCTGGCGAAGATAGAGTTCATGTGGTGCTTTCTGAAGAACAAGGGTGGTTGTTTATTGGGATATATGATGGTTTCAGTGGACCTGATGCGCCTGATTTTCTGATGAGCCATCTATATAGATTTATAAACAAGGAATTGGAAGGTTTACTTTGGGAGTATGAAGATATTCCTGTAGGTCAACATAAACCTATAGCCCCTGAAACTGTAAAACCTATGGTTCCTCCAGAATCCAGTAAACATGAAATGTTTGATACTCTAACTAATTCAAATCAAGAAAGTTTAGAAGCGTCTTCCAGTCCAATAATGATCAAGGATCAATCCTTACCTGGTATCACATGTACTGTTCCAGCATCTGTTCAACTTGGACAATTGACTGGAAAAGGTAGAAAAAGTGTGCGGCTTTATGAGCTACTTCAGATGGAATCCTGGGATGAACATGATGGCCGAATGAGACCCTGCTCGTCTAGTGTAAAAGAACATAGCTGTAGACATCAACATGAAGGTCCCACTACATCAGGAGAACATGGAGGCTCTAGGTTTGATTCAACTAACCATGAGCCAAAAGCTGCTTTTTCTGTTTCAGGACAAAGGCAGAATTCAAGAAAGTCAGTTATCAGTACAAAAATTAGAAAAATGTACAAGAAGCCAAAGTCCTTGTATAAGAAACTTTTTCCTTGGAGTTATGACTGGCATAGGGGGGAAAGTTTTGTTGATGAGAGAATGTTGGAAGCCTCAGGACCAATTAGAAAGTGTAAGTCTGGAGTAGATCATAACGTAGTTTTAAGAGCAATGACTCGTGCTCTTGAAAAAGCAGAAGAGGCATACATGGAAATGGTGGAGCATAGTCTAGACAAAAATCCTGAGCTTGCTTTAATGGGATCATGTGTTTTAGTGATGCTGATGAAGGATCAAGATGTTTATATCATGAACCTTGGAGATAGTCGTGTGATTTTGGCACAGGAAAGACCAAATGATCGTCATCCTAATCCAAGTTTTGTCAAGGATGATGTGAGGCATAGAAATCAATCTAGGGAGTCATTAGTACGCATGGAGTTGGATAGGATATCGGAGGAGTCCCCTATTCATAATCATAATAATCATGTTAACCAGATCAATAAAAATCGAGAGATATCCATTTGCAGATTAAAAATGAGGGCTGTTCAGCTTTCCACAGATCACAGCACTGGTATTGACGAGGAAGTTTTTAGGATAAAAGCAGAACACCCTGATGATAAGCAAGCCATATTCAATGATCGTGTGAAAGGGCATTTAAAAGTCACCAGAGCATTTGGTGCTGGGTTCTTGAAGAGGCCATCTTTTAACGAAGCTCTACTGGAGGTGTTTCAAGTTGATTATGTGGACACTACACCTTACCTAAGCTGCACTCCTTCTGTCATTCATCACCGACTTTCCTCAAGTGATCGGTTCTTGGTACTCTCCTCTGATGGGCTTTACCAATATTTCAGCAATGAAGAGGTGGTTGCCCATGTCACATGGTTCATGGAAAATGTCCCGGGAGGTGATCCTGCACAATACCTTATCGCAGAGCTTCTTCTTTGTGCTGCTAAAAAGAATGGAATGGACTTTCATGAATTGCTTGATATTCCTCATGGAGATCGACGTAAATATCATGATGATGTATCTGTTATGGTGGTTTCTTTGGAGGGAAGGATTTGGAGATCATCAGGATAA 2562 0.4286 MGNGTSRVVGCLVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFESPAISPSNSGRFTVDSSTLDSETLSGSFRHDSIEDSSGMHKSGKNFPETTFKTISGASVSANVSTARTGNQSALFASDVLEPAASFEGTASFAAIPLQPVPRGSGPLNGFMSGPLERGFGSGPLDRGGGFMSGPIEKGVMSGPLDATDKSNFSAPLARGRQRPRLQHLMRSVSGPMKNTLSRTFSKHSAGGSWMQRLFFHPVTQLAWHSKDPKFRPEVSRSCVEVEPPEGEYKHMHNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRFINKELEGLLWEYEDIPVGQHKPIAPETVKPMVPPESSKHEMFDTLTNSNQESLEASSSPIMIKDQSLPGITCTVPASVQLGQLTGKGRKSVRLYELLQMESWDEHDGRMRPCSSSVKEHSCRHQHEGPTTSGEHGGSRFDSTNHEPKAAFSVSGQRQNSRKSVISTKIRKMYKKPKSLYKKLFPWSYDWHRGESFVDERMLEASGPIRKCKSGVDHNVVLRAMTRALEKAEEAYMEMVEHSLDKNPELALMGSCVLVMLMKDQDVYIMNLGDSRVILAQERPNDRHPNPSFVKDDVRHRNQSRESLVRMELDRISEESPIHNHNNHVNQINKNREISICRLKMRAVQLSTDHSTGIDEEVFRIKAEHPDDKQAIFNDRVKGHLKVTRAFGAGFLKRPSFNEALLEVFQVDYVDTTPYLSCTPSVIHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPGGDPAQYLIAELLLCAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0010 853 Gene3D - 263 399 IPR036457 -
Apr8g0010 853 Gene3D - 445 850 IPR036457 -
Apr8g0010 853 SMART PP2C_4 277 842 IPR001932 -
Apr8g0010 853 PANTHER PROTEIN PHOSPHATASE 2C 493 853 IPR015655 GO:0004722|GO:0006470
Apr8g0010 853 PANTHER PROTEIN PHOSPHATASE 2C 11 361 IPR015655 GO:0004722|GO:0006470
Apr8g0010 853 MobiDBLite consensus disorder prediction 67 91 - -
Apr8g0010 853 SUPERFAMILY PP2C-like 289 845 IPR036457 -
Apr8g0010 853 PANTHER PROTEIN PHOSPHATASE 2C 32 11 361 - -
Apr8g0010 853 PANTHER PROTEIN PHOSPHATASE 2C 32 493 853 - -
Apr8g0010 853 MobiDBLite consensus disorder prediction 436 496 - -
Apr8g0010 853 ProSiteProfiles PPM-type phosphatase domain profile. 278 844 IPR001932 -
Apr8g0010 853 Pfam Protein phosphatase 2C 669 793 IPR001932 -
Apr8g0010 853 MobiDBLite consensus disorder prediction 436 460 - -
Apr8g0010 853 CDD PP2Cc 550 844 IPR001932 -
Apr8g0010 853 Coils Coil 551 571 - -
Apr8g0010 853 MobiDBLite consensus disorder prediction 475 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0010 Apr-Chr8 133515 139484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0010 1 853 PP2C-type Phosphatase Gene Family AT2G46920 66.667 0.0 1130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0010 - - cam:101510249 1389.79