Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1876 ATGAAGCTCTTTTCTTTTTTCTTACCTTTATTTTGTCATATATACATTCATCTGCTGCTTCTCTTTACTTTAAACTTGTGGTTTGTCCCAAACAAAATTGTGGCCTTGACACTGGAGAGCCAGATTGATCATTCAGCATTGCTCAAATTCAAGGAATCAATACCCGATGACCCATATGGAATCTTGGCCTCGTGGAATAGTTCAACCCACTTCTGCAAATGGCAAGGAATCAGGTGCAACCCCATGCAAGAAAGAGTTATCAAGTTGAACTTACAAGGATGTAAGTTACATGGAGTCATATCTCCTTATGTGGGCAATCTCTCGTCCATGACAAAACTCAACCTTGGAAACAACAGCTTTTATGGTAACATTCCACAAGAATTGGGTCGTTTAGTACAACTGAAGGTACTTGTTCTCATCAATAACTCATTGGTTGGGGAATTTCCAACTAACTTGACAAGGTGCACTAGCCTCGTACGGTTAGATTTGGCAGGGAACAAATTGATTGGGAAAATACCAATCCATATTGGCTCTCTTGGAAAGCTTCATAATTTGTTCATGGAAAGAAACAATTTAACAGGCCGAATCCCACCATCTGTTGGGAATCTATCATCCATTGTTCAAATTTCGATGGCTTTTAATAACTTGGAGGGAACTCTTCCACAAGAAATATGCCACATGAAAAAATTGATGCTCATTTCAGTGGCTGTCAACAAACTACATGGTGCATTTCCTTCTTGTCTTTATAATATGTCATCTCTTCGTATAATTGCAGCTGCAAGGAATCAATTTAATGGCTCTTTCCCTCCTAACATGTTCATCAACCTCTTCAATCTCCAAGAATTTGCCATTGCTGGTAATCAATTTTCGGGTTCAATCCCAACCTCCATCATAAATGCAACTAACCTTCAAATGCTAGATATTGCTTCAAATCAATTCGCCGGTCAAGTTCCAAGTCTAGGGAAGCTGAAAGATCTATGGGCTGTAAGTTTGTCAGAAAACAATCTAGGTGACAATTCAACCAAGGATTTGGAGTTCTTAAAATCCTTGACAAACTGTAGGAAGTTGCAATTGTTATCTATATCCATCAATAATTTTGGAGGCCATTTGCCAATCTCATTGGGCAGTTTATCCACCGAACTCAGAGAACTATATCTGGGGGAAAATCTGTTGGTAGGAAAAATTCCTGCTGAGTTAGGAAATCTTACTAACTTATCTCTCTTGACCATGGAACTTAATTACTTTGAAGGGGTTATTCCAACCACTTTTGGGAAGTTTAAAAATATGCAAATGCTAGATTTATCCATAAACAAATTGTCAGGGGATATACCAACCTTCATAGGCAACTTGAGTCGGTTGTTTGCGTTGGATTTATCACAAAACTTATTTGAAGGAAATATTCCTCCAAGTATTGGAAATTGCCAAGTGTTACAATACTTAAATCTTTCAAACAACCATCTAAGAGGAGCTATTCCCTTGGAAGTTTTCAGTCTTTCCTCCTTAACAAACTTATTGGACTTGTCCAAAAACTCTTTGAGTGGTAGTCTACCAAAAGAAGTAGGAATACTGCGAAATATTGAAGAGCTAGATGTCTCTGAGAATCATCTGTCTGGTGACATTCCTACAGCCATTGGAGAATGCACAAGCTTAGAGTACCTTCATTTGCAAGGGAACTCTTTCCATGGTATCATACCATCCTCTTTAGCTTCGCTCAAAGGCCTTCAATATTTAGACTTATCACGAAATCAGTTGTCAGGTTCACTTCCTAATGCTCTACAGAATATTTCTGTTTTAGTATACTTGAATGTTTCTTTCAACTTGTTGGATGGTGAAGTTCCAATAGAAGGTGTCTTTCGAAATGCAAGTGGATTTTTGGTGACTGGAAATAGTAAGCTTTGTGGAGGTATTCCAAAGCTGCATCTACAATCATGTCCTGTCAAGGATAGAAAACATTCAGGGCACCACAATTCCAAGTTAGTAGTCATGATAGTTTGTGTGGTCATTTTCCTTTTAATGCTATCGTTTATTTTAACTATCTATTGGATTAGAAGGCCACACAAGAAACCATCATGTGATTCACCAACAATTGACCAGTTGGCTAAGGTTTCATACCAAGACCTACAACATGGAACCGACGGATTCTCGGCTAGAAACTTGATTGGATCAGGAAGTTTTGGCTCTGTGTACAAAGGAACTCTTTTGACAGAAGATAAAGTTGTTGCCATAAAAGTCTTAAACCTTCAAAAGAAGGGAGCTCACAAGACTTTCATTGCTGAATGTAATGCACTCAAGAATATTAGGCATCGAAATCTGGCTAAGATTTTGACATGTTGTTCAAGTATAGATCACAAAGGTGAAGAATTTAAAGCTCTTGTCTTTGAGTACATGGAAAATGGAAGCTTAGAACAATGGCTGCATCCTCAGACAGTAAGTGTGGAGCATCTAAGAACATTAAATTTTGATCAAAGACTAAATATCATTATTGATGTTGCTTCTGCATTACATTATCTTCATCATGAATGCGAGCAACCGATCATTCATTGTGATTTAAAGCCAAGCAATATCCTTCTTGATGAAGAATTGATTGCTCATGTGAGTGATTTTGGCATAGCAAGACTTATCTCAACCATTAATGGTACTTCACAAAAGCAAACTAGTACTATTGGAATAAGGGGTACTATTGGCTATGCTCCTCCTGAGTATGGAGTGGGTTATGAGGTGTCAACATATGGTGACATGTACAGCTTTGGGATTCTTATGTTGGAAATGCTTACTGGAAGAAGACCCACGGAAGAAATGTTTGAAGATGGTCGAAATCTTCATAACTTTGTTGAAATTTCATTTCCTAATAATCTTTTGCAGATTTTGGATCCACAACTTATTCCCCCAACTGAAGCAACAAGATTGGAAGGAAACAACAGGAATCTTAATCCACATTTTGAGAAGTGCTTAATTTCACTATTTAAGATTGGACTTGCTTGTTCTATGGAATCACCAAAAGAAAGAATGGATATGGTTGATGTCGCTAGGGACCTTAATCGAATCAGAAAAGCCTTTCTTGTTGGTAAGATAAATGGGGATCTACTTAATTCTCCACACACTACAGGACACAAAATGATGTTGCACCGTGAAGATTTAAAGCTGAAGTAA 3150 0.3781 MKLFSFFLPLFCHIYIHLLLLFTLNLWFVPNKIVALTLESQIDHSALLKFKESIPDDPYGILASWNSSTHFCKWQGIRCNPMQERVIKLNLQGCKLHGVISPYVGNLSSMTKLNLGNNSFYGNIPQELGRLVQLKVLVLINNSLVGEFPTNLTRCTSLVRLDLAGNKLIGKIPIHIGSLGKLHNLFMERNNLTGRIPPSVGNLSSIVQISMAFNNLEGTLPQEICHMKKLMLISVAVNKLHGAFPSCLYNMSSLRIIAAARNQFNGSFPPNMFINLFNLQEFAIAGNQFSGSIPTSIINATNLQMLDIASNQFAGQVPSLGKLKDLWAVSLSENNLGDNSTKDLEFLKSLTNCRKLQLLSISINNFGGHLPISLGSLSTELRELYLGENLLVGKIPAELGNLTNLSLLTMELNYFEGVIPTTFGKFKNMQMLDLSINKLSGDIPTFIGNLSRLFALDLSQNLFEGNIPPSIGNCQVLQYLNLSNNHLRGAIPLEVFSLSSLTNLLDLSKNSLSGSLPKEVGILRNIEELDVSENHLSGDIPTAIGECTSLEYLHLQGNSFHGIIPSSLASLKGLQYLDLSRNQLSGSLPNALQNISVLVYLNVSFNLLDGEVPIEGVFRNASGFLVTGNSKLCGGIPKLHLQSCPVKDRKHSGHHNSKLVVMIVCVVIFLLMLSFILTIYWIRRPHKKPSCDSPTIDQLAKVSYQDLQHGTDGFSARNLIGSGSFGSVYKGTLLTEDKVVAIKVLNLQKKGAHKTFIAECNALKNIRHRNLAKILTCCSSIDHKGEEFKALVFEYMENGSLEQWLHPQTVSVEHLRTLNFDQRLNIIIDVASALHYLHHECEQPIIHCDLKPSNILLDEELIAHVSDFGIARLISTINGTSQKQTSTIGIRGTIGYAPPEYGVGYEVSTYGDMYSFGILMLEMLTGRRPTEEMFEDGRNLHNFVEISFPNNLLQILDPQLIPPTEATRLEGNNRNLNPHFEKCLISLFKIGLACSMESPKERMDMVDVARDLNRIRKAFLVGKINGDLLNSPHTTGHKMMLHREDLKLK* 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1876 1049 SUPERFAMILY L domain-like 43 336 - -
Apr7g1876 1049 Pfam Leucine rich repeat 404 462 IPR001611 GO:0005515
Apr7g1876 1049 Pfam Leucine rich repeat 549 608 IPR001611 GO:0005515
Apr7g1876 1049 Pfam Protein kinase domain 717 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1876 1049 PANTHER LRR RECEPTOR-LIKE KINASE 31 1022 - -
Apr7g1876 1049 Gene3D Ribonuclease Inhibitor 265 349 IPR032675 -
Apr7g1876 1049 Gene3D Ribonuclease Inhibitor 350 645 IPR032675 -
Apr7g1876 1049 PANTHER OS04G0122200 PROTEIN 31 1022 - -
Apr7g1876 1049 Gene3D Phosphorylase Kinase; domain 1 695 795 - -
Apr7g1876 1049 SUPERFAMILY L domain-like 380 634 - -
Apr7g1876 1049 SMART LRR_typ_2 571 594 IPR003591 -
Apr7g1876 1049 SMART LRR_typ_2 402 425 IPR003591 -
Apr7g1876 1049 SMART LRR_typ_2 523 547 IPR003591 -
Apr7g1876 1049 SMART LRR_typ_2 179 203 IPR003591 -
Apr7g1876 1049 SMART LRR_typ_2 107 131 IPR003591 -
Apr7g1876 1049 SMART LRR_typ_2 450 474 IPR003591 -
Apr7g1876 1049 SMART LRR_typ_2 475 498 IPR003591 -
Apr7g1876 1049 Gene3D Transferase(Phosphotransferase) domain 1 796 1023 - -
Apr7g1876 1049 ProSitePatterns Protein kinases ATP-binding region signature. 720 743 IPR017441 GO:0005524
Apr7g1876 1049 ProSiteProfiles Protein kinase domain profile. 714 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1876 1049 SMART serkin_6 714 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1876 1049 SUPERFAMILY Protein kinase-like (PK-like) 688 1012 IPR011009 -
Apr7g1876 1049 ProSitePatterns Serine/Threonine protein kinases active-site signature. 845 857 IPR008271 GO:0004672|GO:0006468
Apr7g1876 1049 Pfam Leucine rich repeat N-terminal domain 43 80 IPR013210 -
Apr7g1876 1049 Gene3D Ribonuclease Inhibitor 40 264 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1876 Apr-Chr7 26027294 26030873 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1876 41 1020 Receptor kinase-like Gene Family AT3G47570 45.628 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Apr7g1876 Pkinase 3.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1876 - - gmx:100778093 1338.55