Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1873 ATGTTTCTGCTTTTTACTATCAACTCACTTTTGTTTGTCCCAAACACAACTGCTTCTATCTTAGAAAACCAAACCGATTATTTTGAGTTGCTCAAATTCAAGGAATCAATATCAAATGATCCGTATAAAAAATTGGCTTCTTGGACTAGTTCAATCCAGTTTTGCAAGTGGCGTGGAGTCTCGTGCAATCCCATGCAACAAAGAGTTATAGAGTTGAACTTAGAAGGATATAACTTGCATGGACTCATATCTCCTCATGTGGGCAATCTCTCTTTTTTGACAAGTCTCAACCTTGGAAACAACAGCTTCTATGGAAAAATTCCACAAGAATTGGGTCGGTTGTCACAATTACAACAACTTTCTCTCACCAATAACTCATTGGAAGGGGAAATGCCTACAAACTTGACAAGTTGCTCAAATCTCAAAGAGTTACACTTATTTGGTAACAATTTGATCGGTAAGATACCAATTGAAATTGGCTCTCTTCAAAAGCTTCAAAGAATGAGCATTGCTGGAAATAGTTTAACTGGAGCAATCCCACCAAGTATAGGGAATCTGTCATCCCTCACTTCTCTCTCAATGGGTGTTAATAATTTAGAGGGAGATATTCCACAAGAAATATGTCACCTCAAAAGCTTGACAATGATATCAATGCATGTCAACAATTTGACTGGTACATTTCCTTCTTGTCTTTTCAATATGTCATCTCTTACTATAATTTCAGCTGCACATAATGAATTCAATGGCTCTCTTACACCAAACATGTTCCACACCCTACCCAAACTCCGAGAATTCCTACTTGGTGGGAACTATATCTCAGGTCCAATACCAACTTCCATTACAAATGCATCTATCCTCCAAACACTTGATATTGGTCAAAACAATTTGGTGGGCCAAGTTCCAAGTTTAGAAAAGCTACAAGATCTTTGGTTCCTAAGTTTGTATAACAATTACCTAGGCAATTTATCCACCCAACTCAGTCAATTATATCTTGGGGGTAATCAAATATCAGGAAAAATTCCTTCAGAGTTAGGGGATCTAGTTGGTTTAACTGTCTTGACCATGGAAGTTAACCACTTTAAAGGAAATATTCCAGCTACTTTTGGCAAGTTTTGGAAGCTGCAAAAGTTAGAATTGAGTAGAAATAAATTGTCAGGAAATATGCCATCTTTCATAGGCAACCTAAGTAAGTTGTATTATCTGGGTATAGGAGAAAACATGTTAGAAGGAAATATTCCACCAAGTATAGGAAACTGTCAGAAGTTACAATATCTTGACCTTTGGAAAAATAACCTTAGAGGAACCATACCCTTAGAGATTTTTAGTCTCTTCTCTTTGACAAACATGTTGGACTTGTCAAAAAACTTATTGAGTGGCAATCTACCTAGTGAAATTGGCCAATTAAAAAATATTGGGAAGTTGGATGTATCTGAGAATCATTTGTCTGGTGACATTCCTGAAACCATTGGAGAATGCATGAGCTTGGAGTACCTTTATCTGCATAGGAATTCCTTTCATGGAGTCATACCATCCTCTTTGGCTTCACTCAAAGGTCTTCGGCAATTAGACATATCACAAAATCGTTTGTCTGGATCAATTCCTAAAGGTTTGGAGAATATTTCCTTCTTAGAATACTTCAATGTATCTTTTAACATGTTGGATGGTGAATTACCAATGGAAGGTGTCTTCAGAAATGTAAGTGAGTTAGGAGTGATTGGTAATAATAAGCTTTGCGGAGGTATTTCAGAGCTACATCTACCACCATGCCCTATCAAAGGTAAGAGACCTACAAGACACCAAAATTTCATGTTGATAGTGATGATAGTTTGTGTGGTCACTTTTCTTCTCATACTGCCATTTATTCTATCTATCTATTGGGTGAGGAAAGGAAATAAGAAAAAATCTCTTGATTCACCAATAATTGACCACCATAGTAAGGTCTCATACCAAAACCTACATCATGGAACTGATGGGTTCTCAGCTAAAAACCTGATAGGATCAGGAAATTTTGGTTCTGTGTACAAAGGAACTATTGAGTTGGAAGACAATGTTGTTGCCATAAAGGTCCTAAACCTTCAAAAGAAGGGAGCTCAAAAGAGTTTCTTTGTGGAATGTAATGCATTGAAGAACATTAAGCATCGAAACTTGGTTAAGATTTTAACATGTTGTTCCAGCATTGATTATAAAGGTCAAGAATTTAAAGCTCTAGTTTATGAGTACATGGCAAATGGAAGTTTAGAAAGATGGTTGCATCCACCAATAAAAATTGCAGATCAGCACAGAACATTGAGCCTTGATCAAAGATTAAATATCATTGTCGATGTTGCTTCTGCAATTCATTATCTTCACCATGAATGCGGGCAAGCAATCGTTCATTGTGATTTGAAGCCAAGCAATGTTCTTCTTGATGATTACTTGGTAGCTCATGTGAGTGATTTTGGTTTAGCAAGATGGTTCTCAACTACTGCAACTTCTCCAAAGCAAACTAGCACGGTTGGAATAAAGGGGACAATTGGCTATGCTCCTCCAGAATATGGAATGGGTTCAGAGGTGTCCATGGAAGGTGACATATATAGTTTTGGAATTCTTGTTTTGGAAATGTTAACTGGAAGAAGACCTACACATGAAATGTTTGAAGATGGTCATAATCTCCATAACTATGTCAAAATCTCAATTCCAAATAACCTTTCCCATGTTGTGGATCCAACTATTCTTCCCAAGGAATTAAAGGATGCTGCTAATAGTGAAAGCCTGACCGTTATGCATCCCAACGTAGAGAAATGTTTACTTTCACTTTTTAGGATTGCACTTGCTTGTTCAACAGAATCGCCAAAAGAAAGAACGAGTATGGTTGATGTCACTAGGGAACTTAATCTAATCAAAAGTTCCTTTTCTTCAGGAGAGATCAATGGAGATTGGCTACCTGAGAACCACAAAATACAAAATGTATAA 2952 0.3699 MFLLFTINSLLFVPNTTASILENQTDYFELLKFKESISNDPYKKLASWTSSIQFCKWRGVSCNPMQQRVIELNLEGYNLHGLISPHVGNLSFLTSLNLGNNSFYGKIPQELGRLSQLQQLSLTNNSLEGEMPTNLTSCSNLKELHLFGNNLIGKIPIEIGSLQKLQRMSIAGNSLTGAIPPSIGNLSSLTSLSMGVNNLEGDIPQEICHLKSLTMISMHVNNLTGTFPSCLFNMSSLTIISAAHNEFNGSLTPNMFHTLPKLREFLLGGNYISGPIPTSITNASILQTLDIGQNNLVGQVPSLEKLQDLWFLSLYNNYLGNLSTQLSQLYLGGNQISGKIPSELGDLVGLTVLTMEVNHFKGNIPATFGKFWKLQKLELSRNKLSGNMPSFIGNLSKLYYLGIGENMLEGNIPPSIGNCQKLQYLDLWKNNLRGTIPLEIFSLFSLTNMLDLSKNLLSGNLPSEIGQLKNIGKLDVSENHLSGDIPETIGECMSLEYLYLHRNSFHGVIPSSLASLKGLRQLDISQNRLSGSIPKGLENISFLEYFNVSFNMLDGELPMEGVFRNVSELGVIGNNKLCGGISELHLPPCPIKGKRPTRHQNFMLIVMIVCVVTFLLILPFILSIYWVRKGNKKKSLDSPIIDHHSKVSYQNLHHGTDGFSAKNLIGSGNFGSVYKGTIELEDNVVAIKVLNLQKKGAQKSFFVECNALKNIKHRNLVKILTCCSSIDYKGQEFKALVYEYMANGSLERWLHPPIKIADQHRTLSLDQRLNIIVDVASAIHYLHHECGQAIVHCDLKPSNVLLDDYLVAHVSDFGLARWFSTTATSPKQTSTVGIKGTIGYAPPEYGMGSEVSMEGDIYSFGILVLEMLTGRRPTHEMFEDGHNLHNYVKISIPNNLSHVVDPTILPKELKDAANSESLTVMHPNVEKCLLSLFRIALACSTESPKERTSMVDVTRELNLIKSSFSSGEINGDWLPENHKIQNV* 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1873 983 Gene3D Ribonuclease Inhibitor 322 590 IPR032675 -
Apr7g1873 983 SUPERFAMILY Protein kinase-like (PK-like) 634 957 IPR011009 -
Apr7g1873 983 SMART LRR_typ_2 114 138 IPR003591 -
Apr7g1873 983 SMART LRR_typ_2 516 539 IPR003591 -
Apr7g1873 983 SMART LRR_typ_2 306 329 IPR003591 -
Apr7g1873 983 SMART LRR_typ_2 186 210 IPR003591 -
Apr7g1873 983 SMART LRR_typ_2 419 443 IPR003591 -
Apr7g1873 983 SMART LRR_typ_2 468 492 IPR003591 -
Apr7g1873 983 CDD STKc_IRAK 665 960 - -
Apr7g1873 983 ProSitePatterns Protein kinases ATP-binding region signature. 665 688 IPR017441 GO:0005524
Apr7g1873 983 ProSitePatterns Serine/Threonine protein kinases active-site signature. 790 802 IPR008271 GO:0004672|GO:0006468
Apr7g1873 983 Pfam Protein kinase domain 661 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1873 983 SMART LRR_sd22_2 114 143 - -
Apr7g1873 983 SMART LRR_sd22_2 162 188 - -
Apr7g1873 983 SMART LRR_sd22_2 371 397 - -
Apr7g1873 983 SMART LRR_sd22_2 516 542 - -
Apr7g1873 983 SMART LRR_sd22_2 323 346 - -
Apr7g1873 983 PANTHER LRR RECEPTOR-LIKE KINASE 16 324 - -
Apr7g1873 983 PANTHER LRR RECEPTOR-LIKE KINASE 317 967 - -
Apr7g1873 983 ProSiteProfiles Protein kinase domain profile. 659 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1873 983 Pfam Leucine rich repeat 494 553 IPR001611 GO:0005515
Apr7g1873 983 SUPERFAMILY L domain-like 324 579 - -
Apr7g1873 983 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Apr7g1873 983 Gene3D Phosphorylase Kinase; domain 1 641 740 - -
Apr7g1873 983 Gene3D Ribonuclease Inhibitor 148 253 IPR032675 -
Apr7g1873 983 Gene3D Ribonuclease Inhibitor 254 321 IPR032675 -
Apr7g1873 983 PANTHER OS04G0122200 PROTEIN 16 324 - -
Apr7g1873 983 PANTHER OS04G0122200 PROTEIN 317 967 - -
Apr7g1873 983 SMART serkin_6 659 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1873 983 SUPERFAMILY L domain-like 25 319 - -
Apr7g1873 983 Gene3D Ribonuclease Inhibitor 27 139 IPR032675 -
Apr7g1873 983 Gene3D Transferase(Phosphotransferase) domain 1 741 970 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1873 Apr-Chr7 25990320 25993510 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1873 23 964 Receptor kinase-like Gene Family AT3G47570 43.505 0.0 793
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Apr7g1873 Pkinase 2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1873 - - gmx:100792724 1278.85