Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1863 ATGAAGCAACCATCAAAGCCATGGAGGCCCTTCACAGCAAATTGCTGTTCAATGGAAGATCAAAGCATCTTTAGAAACATGAGCCGGTGCAAGCCATCGCGTTCAGACTTGTCAAAGAACATTGCTCCTTTACCATCATTTAGGAGACTATCTTTCTCTGATCTTAGCCGTTCCTCTTCCGTGCGAATCAACGAAGACCTTGCACAGTCTTTTGGTTCGGATTTGCATGACTTTCAGCTGAGTGAGCTACGTGCCATTACCCAGAATTTTTCCAGCAATTTCTTGCTGGGTGAAGGTGGGTTTGGAACTGTGCATAAGGGTTATATTGATGATAACTTGAGACAGGGTTTGAAGGCTCAACCTGTGGCTGTTAAGCTTCTCGATATTGAAGGCTTACAAGGACACCGTGAATGGCTTGCAGAAGTGATTTTTCTTGGGCAGCTAAGACACCCCAATTTGGTTAAGTTAATTGGGTATTGTTGTGAGGATGAAGAACGGTTACTTGTCTATGAATTTATGCCACGTGGAAGCTTGGAAAATCACTTGTTCAGAAGGCTAACATCACTGCCATGGGCAACAAGATTAAGAATCGCAATAGGTGCTGCTAAAGGCCTTTCCTTCTTGCATGGAGCTGAGAAACCAGTCATTTACAGAGACTTCAAGACTTCCAATGTTTTGCTTGATTCAGACTTCACAGCAAAATTGTCTGATTTTGGACTTGCAAAAATGGGGCCAGAGGGATCAAACACACACGTTTCAACCAGAGTTATGGGCACTTATGGATATGCAGCCCCAGAATACATTTCAACAGGACACTTAACCACCAAAAGTGATGTGTATAGCTTTGGGGTAGTCCTGCTAGAACTGCTTACAGGAAGGAGAGCTATGGACAAGACAAGACCAAAGACTGAGCAAAACCTTGTGGATTGGTCAAAACCTTACTTGAGTAGCAGTAGGAGGTTGCGGTACATTGTGGATCCAAGGCTTGCAGGCCAATATTCTGTGAAGGGTACAAAGGATATGGCCCATTTGGCAGTGCAATGCATAAGTTTGAATCCTAAAGACAGACCAAGAATGGCAACGATTGTTGAAACTCTTGAAAGCATGCAACAGTACAAAGACATGGCAGTTACCAGTGGACACTGGCCAGTGTCATCAAAATCTACTAGAAATGGAGCCTCCAACAATAAGGTGAAAGCCAGATCCGGTGCAAACCTCAAGCAACCCTCTCCTCCAGTTCCAAGTAGAAAAACTTGA 1257 0.4399 MKQPSKPWRPFTANCCSMEDQSIFRNMSRCKPSRSDLSKNIAPLPSFRRLSFSDLSRSSSVRINEDLAQSFGSDLHDFQLSELRAITQNFSSNFLLGEGGFGTVHKGYIDDNLRQGLKAQPVAVKLLDIEGLQGHREWLAEVIFLGQLRHPNLVKLIGYCCEDEERLLVYEFMPRGSLENHLFRRLTSLPWATRLRIAIGAAKGLSFLHGAEKPVIYRDFKTSNVLLDSDFTAKLSDFGLAKMGPEGSNTHVSTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRAMDKTRPKTEQNLVDWSKPYLSSSRRLRYIVDPRLAGQYSVKGTKDMAHLAVQCISLNPKDRPRMATIVETLESMQQYKDMAVTSGHWPVSSKSTRNGASNNKVKARSGANLKQPSPPVPSRKT* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1863 418 Gene3D Phosphorylase Kinase; domain 1 53 172 - -
Apr7g1863 418 ProSitePatterns Protein kinases ATP-binding region signature. 96 125 IPR017441 GO:0005524
Apr7g1863 418 Gene3D Transferase(Phosphotransferase) domain 1 173 384 - -
Apr7g1863 418 SUPERFAMILY Protein kinase-like (PK-like) 72 369 IPR011009 -
Apr7g1863 418 PANTHER OS01G0588500 PROTEIN-RELATED 31 403 - -
Apr7g1863 418 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL15-RELATED 31 403 - -
Apr7g1863 418 Pfam Protein tyrosine and serine/threonine kinase 96 366 IPR001245 GO:0004672|GO:0006468
Apr7g1863 418 MobiDBLite consensus disorder prediction 378 418 - -
Apr7g1863 418 ProSiteProfiles Protein kinase domain profile. 90 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1863 418 CDD STKc_IRAK 96 369 - -
Apr7g1863 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1863 Apr-Chr7 25904868 25908412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1863 78 382 Glycoside Hydrolase AT3G07070 51.456 3.02e-103 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Apr7g1863 PK_Tyr_Ser-Thr 4.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1863 - - gmx:100814241 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1863 7 25904868 25908412 Apr7g1863 7 25904868 25908412 ECH