Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1856 ATGTTCGGTGGCGGAGGTGATGATGCCCTTGCGGCTCGCCTTGGCATGGTTTCGCCGTCGCTGCTGAATCCGGCGACATCGACGGTGATGTCTGGAGAGATATCTCCGGCGCCGGCGAGGGAGGAGAGGGCTCCTGCTCAGCCGCAGTGGAGCCAGCAGGAGACGAGAGAGTTCATAGCAATACGCGCGGAGTTTGAGAGGGATTTCACTGCGTCGAAGCGGAATAGGACGCTTTGGGAAGCGGTGAGCTCTAAGATGAGGGAGAGAGGGTTCAGGAGAAGCCCCGAACAGTGCAAATGCAAGTGGAAGAACCTCGTTAATCGCTATAAGGGAAAAGAGACATCTGACCCAGAGCAGGGCAGGCAATGCCCATTTTTTGAAGAGTTGCGTGCAGTCTTTACTGAAAGAGCACATAACTTGCAACGAAAACAAATGCTTCTTGAATCTGAAACTCGTTCAGCTCAAACCAAGAAAGGGGTGAAAAGATTAAGTGGAGATCGGTCCTCAGAGGAGCTCTCGGAAGATGATGATGAGGTTGAAGATGACAGCGAAGAGGAGAGGCCTTCCAGAAGCAATACCCGCAAAAGGAAAGTTGCAATGGAGAAGTCTTCAAGGGCAAACAATCCATCAAATGCTGTCATTAATAGTACTAGTAGTATTCAGGACATGCTCAAGGAGTTTTTTCAACATCAGTTAAGGATGGAGATGCAATGGCGGGAGATGATGGAAAGGCGTGCTCATGAAAGACAGTTGTTTGAGCAGGAATGGCGGCAGTCAATGGAGAAGCTTGAGAAAGAGAGATTAATGATTGAGCAAGCATGGAGGGAGAGAGAAGAACAGAGGAGAATGAGAGAAGAGAGTAGGGCAGAGAGAAGGGATGCTCTATTGACGACCCTTTTGAACAAACTCATTAATGAATCTAACTAA 927 0.4898 MFGGGGDDALAARLGMVSPSLLNPATSTVMSGEISPAPAREERAPAQPQWSQQETREFIAIRAEFERDFTASKRNRTLWEAVSSKMRERGFRRSPEQCKCKWKNLVNRYKGKETSDPEQGRQCPFFEELRAVFTERAHNLQRKQMLLESETRSAQTKKGVKRLSGDRSSEELSEDDDEVEDDSEEERPSRSNTRKRKVAMEKSSRANNPSNAVINSTSSIQDMLKEFFQHQLRMEMQWREMMERRAHERQLFEQEWRQSMEKLEKERLMIEQAWREREEQRRMREESRAERRDALLTTLLNKLINESN* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1856 308 CDD GT1 48 113 - -
Apr7g1856 308 MobiDBLite consensus disorder prediction 154 169 - -
Apr7g1856 308 PANTHER - 46 306 - -
Apr7g1856 308 MobiDBLite consensus disorder prediction 21 53 - -
Apr7g1856 308 MobiDBLite consensus disorder prediction 144 215 - -
Apr7g1856 308 Gene3D - 50 111 - -
Apr7g1856 308 MobiDBLite consensus disorder prediction 185 202 - -
Apr7g1856 308 SMART sant 46 108 IPR001005 -
Apr7g1856 308 Coils Coil 253 273 - -
Apr7g1856 308 Pfam Myb/SANT-like DNA-binding domain 48 131 IPR044822 -
Apr7g1856 308 MobiDBLite consensus disorder prediction 170 184 - -
Apr7g1856 308 ProSiteProfiles Myb-like domain profile. 50 106 IPR001005 -
Apr7g1856 308 PANTHER - 46 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1856 Apr-Chr7 25856328 25858814 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1856 48 303 Trihelix Transcription Factor Family AT2G38250 43.969 1.13e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Apr7g1856 Myb_DNA-bind_4 7.3e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1856 - - gmx:100812635 436.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1856 7 25856328 25858814 Apr7g1856 7 25856328 25858814 ECH