Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1849 ATGTCCCTCCTCAGCAGATTCTTCTACAAGCGACCCCCAGATGGCTTACTCGAATTCATCGACAGAGTATACGTTTTCGATTCTTGCTTCTCCACCGAAGCATTACCCGACGGAATGTACCAACTCTACCTACACGAAATTCTCACCGAGCTACACGAAGAGTTTCCAGAATCTTCCTTCCTCGCCTTCAATTTCCGCGACGGCGAGAAGCGTAGCCACTTCGCTGAGGTTCTCTGCGAGTACGATGTTACCGTGATGGATTATCCGAAACAATACGAGGGTTGTCCCATTCTGCCACTGTCTCTGGTTCAGCACTTTCTTCGCGTTTGTGAGAGTTGGCTCTCACTTGGGAATCATCACAACAACGTTATTCTCTTCCACTGTGAAAGAGGGGGTTGGCCCCTTTTGGCTTTTCTACTTGCAGGTTTCCTCATTTTCAGAAGGGTTCACAGTGGTGAACGTAGGACACTTGAAATGGTTCATAGGGAGGCACCTAAGGGTTTGTTGCAGCTGTTGTCACCGTTGAATCCTTTACCTTCTCAGCTTCGTTATATTCAGTATGTGGCAAGGAGGAACATTGCTCCTGAGTGGCCCCCACCTGAGAGAGCTTTGTCTTTGGATTGTGTTATTCTTAGAGGAATTCCTGCTTTTGATTCTCAGAATGGGTGTAGGCCTTTGTTTAGGATTTTTGGGAGGAATTTGCTTAGCAAGGGTGGGCTTTCAACCCAGACGATTTATTCCATGCACAAGAAGAAGAAGAGTTTGAGGCATTACCGACAGGTAGACTGTGATGTGATTAAGATTGATATTCAATGTTTGGTGCAAGGGGATGTGGTGCTAGAGTGTGTCCATTTGGATTTGGATCCGGAAAGGGAAGTGATGATGTTTCGTGTGATGTTCAACACGGCATTCATTCGGTCCAACATTTTGATGCTGAACGCTGAAAACTTAGACATTCTTTGGGATTCGAAGGAGAGGTATCCGAAAGGTTTCCGGGCTGAGGTTTTGTTTGGGGAGGTTGAAAATATAAGTCCTCCAAGGGTTCCAACAACAACCATTTTAAATGGTGAGGAGAAAGGTGGATTGCCCATAGAGGCATTTTCAAGGGTTCAAGAACTTTTTAGTGGTGTAGAATGGGTTGAAAGTGGTGATGCTGCTGCTGTCTGGTTGCTCAAACAACTTACAGTCTTAAATGATGCCAAAGAACTATCAAGGTTTCAAGGTAAAGGAAGTTGGTATTCATCACCTGCTGACTCTGAAGAGGAAAATAATGAATCAAGCGCTGCTGACAGTGCAGATGAGGCTTTTGATTTTGTTCCCAAGTCTTCTGCTGATTCTTCGAAATTATTGACATCTGATATTCCTGATTTGATTCATTTAGCTTTTGAGAATGATGGTGGAGATTATGTAAATCTCACTTCAAGAACACCTGATCAGTCATTGACTGATATTGTTTCATCACCTCATCATGCTCAAAGCAAGGAATTTTCTCCTTGTTCATCTCCACCATCGCCTTCCCCGATTCCTCCTATTCAACCTCCACATCCAACAGCATCACAAGCACCACCTCCACCAGCTCCTTTGTCTTTAGGTCTTGATGCTGATAAGGCTACTAGTTCACCTCCACATCCATCAAGACCAGTACAATCAGGTTTAGCTGCCCCTCCCCCTCCCCCACCTCCACCCCCCATAGTTCACAATGCTACCGATGCTTCTATGTTGGCTTCAGCTCGTCCTCCCCCTCCCCCTCCCCCTCTGATGGGTCATAATGTCAATAGTACTCCTAGTCCACCTCCACCTTCTTGTGGACCTGTACTATCAGTTTTGGTGCCACCGCCACCACCTCCTCCTCCTCCTCCAGGACCTGTACGAACAAGTTCAGCCTCACTGCCATCGCCACCTCCTCCTCCAGTTCATGTACAGACAGGTTTAGCTCCACCACCACCACCACCTCCACCTCCACCTCCAGTTCCTGCACGCATAGGTTCAGTTCCACCACCTCCGCCTCCACCTCTGCCTCCTCCAGGTCCTGCACAAACAGGTTCATCCTTGCGTTCTCCACCTCCACCTCCACCTCCTCTGAGATCTGTACAAACAGGTTTAGCTCCACCACCTCCACCTCCTCCAGGTCCTGCACGAACAGGTTCAACCTTGCCTCCTCCACCTCCGCCTCCTCCAGGATCTGTACGAACAGTTTCAGCTCCACCTCCTCCACCTCCACCTCCTCCAGGATCTGTACAAACTGGTTCAGCCCCACCACCTCCACCCCTGCCAAGTGTACAAACTGGTTCAGCTCCACCACCTCCACCTCCAGCTCCTCCAGGACCTGTACGATTGGGTTCAGCTCCGCCACCAGCACCAAAGCCTCCAAATGCTCCTCCTCCACCACCTGGCCATGGTGCATCAGTGCCACCTCCACCTCCTGCAGCTAGGGCCTCTGGTGTGGCACCACTGCCAGGCAAAGCTTCAACAACAAATGTTGGAAGAGGTCGTGGAACTGGTGGGACTGTTAATGCTCCTAAGAAAACTGTGCTAAAACCCCTACATTGGGTGAAAGTTGCCCGAGCAACTCAAGGAAGTCTATGGGCTGATTCGCAGAAACAGGATAGTGAAACCAGGGCCCCTGAAATAGATATATCAGAACTTGAGAGCCTGTTTTCAGCAGCATCTACTTCTGATGGGAGCAGTACTAAAAGTGGCGCTCGGCGTGGTTCTAATATCAACAAACCTGAGAAAGTACAATTGGTTGACTTGCGTAGAGCATATAATTGTGAAATAATGCTCTCTAAAATCAAAATTCCTTTGCCAGATATGCTTAATGCAGTTCTGGCATTGGATTCTTCTGTTCTGGATATTGATCAGGTTGAGAATCTCATCAAGTTCTGTCCGACAAAAGAAGAGATGGAAATGTTGAAGAACTATACAGGAAACAAGGAAATGCTTGGAAAATGTGAACAGTTTTTTATGGAGCTGATGAAGGTTCCGCGTGTAGAATCTAAATTAAGGGTTTTTGCTTTTAAAATCACCTTTTCTTCTCAGGTTAACGATTTGAGGTTAAATTTGAATACAATCAATGATGCAGCCAGAGAGGTGAAAGAATCTGGAAAATTGCGTCAAATAATGCAGACTATTCTTACTTTGGGCAATGCTTTGAATCAGGGAACAGCTCGGGGATCAGCAGTAGGGTTCAAACTGGACAGCCTTCTTAAATTATCTGATACTCGAGCAAGAAATAACAAAATGACTTTAATGCATTATTTGTGTAAGCTTCTTGCGGAGAAAATGCCAGAATTGCTAGATTTTGATAAGGATCTTGTCCATTTGGAAGCAGCTTCTAAGATTCAACTAAAAGCATTAGCTGAAGAAATGCAAGCTGTGAATAAAGGTCTAGAGAAAGTTGTGCAAGAACTGACTGCTTCTGAAAATGACGGTGTAATATCTACAGGATTTCGCACGGTGTTGAAGAATTTTCTAGATATTGCTGAAGCTGAAGTGAGGTCCCTTATATCATTGTATTCTGAAGTGGGAAGAAATGCAGATTCTTTGTCGCAGTACTTTGGAGAGGATCCAGCTAGATGCCCCTTTGAACAAGTGACACAAATCCTTGTTGTCTTTGTCAAGATGTTCAACAAGTCAAGGGAGGAGAATGAAAGGCAGGCAGATGCTGAAAAAAAGAAATTAGAGAAAGAAGCCATGAAGGAAAGAACAGCAAATAACATGCATTCCAAACGAGATGGTGTTCGATAG 3747 0.4593 MSLLSRFFYKRPPDGLLEFIDRVYVFDSCFSTEALPDGMYQLYLHEILTELHEEFPESSFLAFNFRDGEKRSHFAEVLCEYDVTVMDYPKQYEGCPILPLSLVQHFLRVCESWLSLGNHHNNVILFHCERGGWPLLAFLLAGFLIFRRVHSGERRTLEMVHREAPKGLLQLLSPLNPLPSQLRYIQYVARRNIAPEWPPPERALSLDCVILRGIPAFDSQNGCRPLFRIFGRNLLSKGGLSTQTIYSMHKKKKSLRHYRQVDCDVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRVMFNTAFIRSNILMLNAENLDILWDSKERYPKGFRAEVLFGEVENISPPRVPTTTILNGEEKGGLPIEAFSRVQELFSGVEWVESGDAAAVWLLKQLTVLNDAKELSRFQGKGSWYSSPADSEEENNESSAADSADEAFDFVPKSSADSSKLLTSDIPDLIHLAFENDGGDYVNLTSRTPDQSLTDIVSSPHHAQSKEFSPCSSPPSPSPIPPIQPPHPTASQAPPPPAPLSLGLDADKATSSPPHPSRPVQSGLAAPPPPPPPPPIVHNATDASMLASARPPPPPPPLMGHNVNSTPSPPPPSCGPVLSVLVPPPPPPPPPPGPVRTSSASLPSPPPPPVHVQTGLAPPPPPPPPPPPVPARIGSVPPPPPPPLPPPGPAQTGSSLRSPPPPPPPLRSVQTGLAPPPPPPPGPARTGSTLPPPPPPPPGSVRTVSAPPPPPPPPPGSVQTGSAPPPPPLPSVQTGSAPPPPPPAPPGPVRLGSAPPPAPKPPNAPPPPPGHGASVPPPPPAARASGVAPLPGKASTTNVGRGRGTGGTVNAPKKTVLKPLHWVKVARATQGSLWADSQKQDSETRAPEIDISELESLFSAASTSDGSSTKSGARRGSNINKPEKVQLVDLRRAYNCEIMLSKIKIPLPDMLNAVLALDSSVLDIDQVENLIKFCPTKEEMEMLKNYTGNKEMLGKCEQFFMELMKVPRVESKLRVFAFKITFSSQVNDLRLNLNTINDAAREVKESGKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVNKGLEKVVQELTASENDGVISTGFRTVLKNFLDIAEAEVRSLISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILVVFVKMFNKSREENERQADAEKKKLEKEAMKERTANNMHSKRDGVR* 1249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1849 1248 Pfam Formin Homology 2 Domain 840 1210 IPR015425 -
Apr7g1849 1248 Coils Coil 1014 1034 - -
Apr7g1849 1248 MobiDBLite consensus disorder prediction 1213 1248 - -
Apr7g1849 1248 Gene3D - 198 343 - -
Apr7g1849 1248 Coils Coil 1116 1140 - -
Apr7g1849 1248 MobiDBLite consensus disorder prediction 548 566 - -
Apr7g1849 1248 Pfam C2 domain of PTEN tumour-suppressor protein 200 338 IPR014020 -
Apr7g1849 1248 MobiDBLite consensus disorder prediction 576 813 - -
Apr7g1849 1248 SUPERFAMILY Formin homology 2 domain (FH2 domain) 910 1238 - -
Apr7g1849 1248 MobiDBLite consensus disorder prediction 480 499 - -
Apr7g1849 1248 MobiDBLite consensus disorder prediction 408 432 - -
Apr7g1849 1248 Coils Coil 1210 1237 - -
Apr7g1849 1248 MobiDBLite consensus disorder prediction 408 422 - -
Apr7g1849 1248 SMART it6_source 471 1244 IPR015425 -
Apr7g1849 1248 Gene3D Protein tyrosine phosphatase superfamily 16 192 IPR029021 -
Apr7g1849 1248 ProSiteProfiles C2 tensin-type domain profile. 201 340 IPR014020 -
Apr7g1849 1248 SMART PTEN_C2_2 199 339 IPR014020 -
Apr7g1849 1248 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 340 IPR035892 -
Apr7g1849 1248 Gene3D Formin, FH2 domain 836 1221 IPR042201 -
Apr7g1849 1248 ProSiteProfiles Formin homology-2 (FH2) domain profile. 835 1235 IPR015425 -
Apr7g1849 1248 PANTHER FORMIN-J 735 1239 - -
Apr7g1849 1248 PANTHER FORMIN-J 1 737 - -
Apr7g1849 1248 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 18 188 IPR029021 -
Apr7g1849 1248 MobiDBLite consensus disorder prediction 480 841 - -
Apr7g1849 1248 MobiDBLite consensus disorder prediction 500 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1849 Apr-Chr7 25785257 25795057 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1849 1 473 FH2 protein (formin) Gene Family AT1G31810 74.630 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1849 - - gmx:100781274 1672.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1849 7 25785257 25795057 Apr7g1849 7 25785257 25795057 ECH