Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1827 ATGGATTTTTCGAACTCTCTCTTGAGAATGGAGCAAATTGCTGGAAAAGGTAGAGGATTTGTTGCAGCACAATCCCTTCAAGCTGGTCAAATAATTCTCAAAGAACCCCCTCTCGTTCTCTATTCTTCTTCTCCTCTATTCTCTTCTTCATCATCTTTCTCTTACTGTGATCACTGCTTCAGAATCTTACCATCTAACACTCACACTCTTCCATGCCCTTCTTGCTCTCACCACCATTTCTGCACCCAAAACTGCCTCTCCATTGCCCTCAAATCATCACACTCTTCATGGGTATGCAAAGCTTTGTCCTTTCTGCAAGATTCCAATTCACTGTTTCAACAATCCCATGTACGCCAAGTCCAAGCTCGTTTCATTGTTGCTGCTTACAACCTTTTCCTTCAATCCCCTTCGGATCTACAAACTCTACTTTCTCTTCATGGCACTCCAGATTCTACCATTGTTGATGCTGCTAAGTTTCTTCACTCTTTGATCTCACCCCTTTTCTTACCCCTCAGTGATTTTTCTGTTGAATTTATTTCTCAACTTCTTGCCAAGGATAGACTGAACTCCTTTTGCTTAATGGATCCTTATTCCCCTGATGGGCCTCAAAGATCCATTAAAGCATATGCTATTTACCCAAAAGCAACATTTTTTAACCATGATTGTATTCCCAATGCATGTCGGTTTGATTATGTGGACACTAGTGATCCTGGTGATGAGCACAACACTGACATTGTTATTAGGTTGATTGAGGATGTTCCTAAAGGGAAAGAGGTTTGCATTAGCTATTTCAGGATCAGCAGGGATTATCCTACTAGGAAGGAGATCTTGATGGAGGATTATGGATTCACTTGTGACTGTGATAGGTGCAAGATTGAAGCAAATTGGAATGATGGGCAAAGCCAAGGAGAGAACAGTGACTTGCCACACGTGCGTTTCCTTAACAAGTATGTTTGCGAGAAAAAGAATTGTGCTGGCACTATGGCTCCTTTGCCTCCAAAAGATGATGTACCATCTCATGTTTTGGAGTGTAATTTCTGTGGTAATTTGGAAAAATTGACATTGCTTAGTCCTTGA 1077 0.4123 MDFSNSLLRMEQIAGKGRGFVAAQSLQAGQIILKEPPLVLYSSSPLFSSSSSFSYCDHCFRILPSNTHTLPCPSCSHHHFCTQNCLSIALKSSHSSWVCKALSFLQDSNSLFQQSHVRQVQARFIVAAYNLFLQSPSDLQTLLSLHGTPDSTIVDAAKFLHSLISPLFLPLSDFSVEFISQLLAKDRLNSFCLMDPYSPDGPQRSIKAYAIYPKATFFNHDCIPNACRFDYVDTSDPGDEHNTDIVIRLIEDVPKGKEVCISYFRISRDYPTRKEILMEDYGFTCDCDRCKIEANWNDGQSQGENSDLPHVRFLNKYVCEKKNCAGTMAPLPPKDDVPSHVLECNFCGNLEKLTLLSP* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1827 358 Gene3D SET domain 19 291 IPR046341 -
Apr7g1827 358 SMART set_7 6 270 IPR001214 GO:0005515
Apr7g1827 358 Gene3D - 112 190 - -
Apr7g1827 358 ProSiteProfiles SET domain profile. 6 264 IPR001214 GO:0005515
Apr7g1827 358 SUPERFAMILY SET domain 6 286 IPR046341 -
Apr7g1827 358 CDD SET_SMYD 188 290 - -
Apr7g1827 358 Gene3D - 55 108 - -
Apr7g1827 358 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 2 351 IPR044238 -
Apr7g1827 358 Pfam SET domain 17 263 IPR001214 GO:0005515
Apr7g1827 358 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 2 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1827 Apr-Chr7 25602067 25603143 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Apr7g1827 SET 3.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1827 - - gmx:100808530 502.286