Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1818 ATGGAGGGTGGTGGAAGAGAAGCTTATAATGGAGTGGTGATGACTATGACAAGAGACCCAAAACCAAGGCTTAGATGGACAGCAGATCTTCATGACCGGTTTGTTGATGCTGTCACAAAGCTTGGTGGCCCTGACAAGGCGACTCCAAAGTCTGTTATGAGGTTAATGGGCTTGAAAGGTCTGACACTATATCATTTGAAGAGTCATTTACAGAAGTATAGACTTGGACAACAGGCTCGAAAACAAAATGAAGAACTGCACAAAGAGAATAATAGATGCTCGTATGTAAATTTCAGCAATCGTTCTTCAGAGCCTAACACTAGTTACAGATGTGACAATGAAAGGGGAGAAATCCCAATAGCTGAAGCATTGAGGCGTCAGATTGAAGTTCAAAAGAGATTGGAAGAACAGTTGGAGGTACAGAAGAAGTTGCAGATGAGAATAGAGGCCCAAGGGAAGTATTTGCAAGCTGTGTTAGAGAAAGCCCAGAGAAACCTCTCTCTAGATGGGCCAGGTAGTCTTGAAGCATCAAGAGCTCAATTGACTGAATTCAACTCTGCTTTGTCAAATTTCATGGAAAACATGAATAAAGATAGCAAAGATAACATAGTAGAAGTGAATGATTTTTATAATAAGAGTCATGGCTCACCTTTCCATTATCAAGAAGTAGGGAGAGGAGAAAATAGGGATCAAAAGCCCAAGGTTGAAGGGGGTTCAATACAGTTTGACTTAAACATCAAAGGTAGCAATGACCTTGTGTCTGCATGTGGAGAATGGAAGCCAATATGA 789 0.4106 MEGGGREAYNGVVMTMTRDPKPRLRWTADLHDRFVDAVTKLGGPDKATPKSVMRLMGLKGLTLYHLKSHLQKYRLGQQARKQNEELHKENNRCSYVNFSNRSSEPNTSYRCDNERGEIPIAEALRRQIEVQKRLEEQLEVQKKLQMRIEAQGKYLQAVLEKAQRNLSLDGPGSLEASRAQLTEFNSALSNFMENMNKDSKDNIVEVNDFYNKSHGSPFHYQEVGRGENRDQKPKVEGGSIQFDLNIKGSNDLVSACGEWKPI* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1818 262 Gene3D - 20 78 - -
Apr7g1818 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 78 IPR017930 -
Apr7g1818 262 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 21 76 IPR006447 GO:0003677
Apr7g1818 262 Pfam MYB-CC type transfactor, LHEQLE motif 119 164 IPR025756 -
Apr7g1818 262 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 10 254 - -
Apr7g1818 262 SUPERFAMILY Homeodomain-like 21 78 IPR009057 -
Apr7g1818 262 Pfam Myb-like DNA-binding domain 24 74 IPR001005 -
Apr7g1818 262 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 10 254 IPR044848 GO:0003700
Apr7g1818 262 Coils Coil 121 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1818 Apr-Chr7 25537243 25539863 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1818 12 190 G2-like Transcription Factor Family AT3G24120 53.514 1.60e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Apr7g1818 DUF3617 2.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1818 - - gmx:100810146 464.922