Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1812 ATGGCAGCTTGCACTGTCTACTCAACACAGTCTCTCAGCACAAATTGCTCCATCTCAATCCCATCAAAAACACAATTGGGTTTTCATCAAAAACAAGTAGTTTTCTACACCACAAGTAGGAGGAACAGCAAGAGAGGCAGCAACACTGGCAGCCCCTATGTGATAACATGTGCAGCAGGTGACTCGCAGACAGTGGTGATTGGTCTAGCTGCTGACTCAGGTTGTGGGAAAAGTACTTTCATGAGGAGGTTGACCAGTGTGTTTGGAGGAGCAGCTGAACCACCAAAGGGTGGCAACCCTGATTCCAACACTCTCATCAGTGACACCACCACAGTGATATGCTTAGATGATTACCATTCATTGGATAGAACGGGTAGAAAAGAGAAGGGTGTCACTGCACTTGATCCAAGAGCGAACGATTTTGATCTCATGTATGAACAAGTTAAAGCTCTTAAGGATGGAATTTCTGTTGAAAAACCCATTTACAACCATGTCACTGGTCTCTTGGATCCACCAGAACTCATTAAACCTCCTAAAATCTTAGTCATTGAAGGTTTGCATCCAATGTTTGATGCTCGGGTTAGAGAACTCTTGGACTTTAGCATCTACCTAGACATTAGCAATGAGGTGAAATTCGCTTGGAAAATTCAGAGAGACATGGCAGAACGTGGACATAGTCTTGAAAGCATCAAGGCTAGCATTGAAGCAAGAAAGCCTGATTTTGACGCTTATATTGATCCACAAAAGCAATATGCAGATGCAGTAATAGAAGTGTTGCCAACCCAACTCATTCCAGATGACAATGAAGGTAAGATTTTAAGGGTGAGATTAATACAGAAAGAGGGGGTTAAGCATTTTAGCCCAGTTTACTTGTTTGATGAGGGCTCTACCATTTCTTGGATACCCTGCGGAAGGAAGCTTACATGCTCTTATCCTGGCATCAAATTCTTCTATGGACCAGACACTTACTTTGGAAGCGAGGTGTCCGTTGTAGAAATGGATGGGCAATTTGACAGATTAGATGAACTAATATATGTTGAAAGCCACCTTAGCAACCTCTCTAGCAAGTTCTATGGAGAAGTTACTCAACAAATGTTGAAGCATGCTGATTTCCCAGGTAGCAACAATGGAACAGGTCTGTTCCAAACCATAGTTGGTTTGAAGATAAGAGACCTATATGAGCAGATAATAAGCACTAAGGTTGAGACTCCAGTAGGAGCAGCAAAGGCTTAG 1233 0.4266 MAACTVYSTQSLSTNCSISIPSKTQLGFHQKQVVFYTTSRRNSKRGSNTGSPYVITCAAGDSQTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYEQVKALKDGISVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMFDARVRELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKHFSPVYLFDEGSTISWIPCGRKLTCSYPGIKFFYGPDTYFGSEVSVVEMDGQFDRLDELIYVESHLSNLSSKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIISTKVETPVGAAKA* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1812 410 PRINTS Phosphoribulokinase family signature 71 88 IPR006082 GO:0005524|GO:0005975|GO:0008974
Apr7g1812 410 PRINTS Phosphoribulokinase family signature 180 198 IPR006082 GO:0005524|GO:0005975|GO:0008974
Apr7g1812 410 PRINTS Phosphoribulokinase family signature 215 232 IPR006082 GO:0005524|GO:0005975|GO:0008974
Apr7g1812 410 PRINTS Phosphoribulokinase family signature 233 256 IPR006082 GO:0005524|GO:0005975|GO:0008974
Apr7g1812 410 PANTHER PHOSPHORIBULOKINASE 6 410 - -
Apr7g1812 410 CDD PRK 66 354 - -
Apr7g1812 410 Gene3D - 61 295 IPR027417 -
Apr7g1812 410 Pfam Phosphoribulokinase / Uridine kinase family 66 264 IPR006083 GO:0005524|GO:0016301
Apr7g1812 410 ProSitePatterns Phosphoribulokinase signature. 215 228 IPR006082 GO:0005524|GO:0005975|GO:0008974
Apr7g1812 410 PANTHER URIDINE KINASE 6 410 - -
Apr7g1812 410 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 335 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1812 118 292 PRT Gene Family AT3G27440 26.404 2.97e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1812 K00855 - gmx:100807126 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1812 7 25491103 25494775 Apr7g1812 7 25491103 25494775 ECH