Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1807 ATGGCAGAATGTGAGAAGGTAAGAATATTGGGAAAGGGTTCTTATGCCGTTGTTTACCTTGTTGTTATTAGTGCTCCCCAAAAATGGAATTCGAAGGTCGCAGCTATGAAGAGTTCAACATCTAACGCATTTGGTTCATTCGTACTGCAAAAAGAAAAAAAAATAATGGAGTTATTCATTGGTTGCAAAGAAATCGTTCAATGTTATTTTGGCCAATTCACAGTGCAAAAGGGTCATCTCACCTACGATCTTTTTATGGAATTTTCTCCTTATGGTTCTCTTGGAGATTTAATAAGGAAGAAGCCACTTATGGAAAATGAAGTAAGAATCTACACTTGCATGCTTCTCAAAGGGCTTTCTTGCATTCATGAAAGAGGAGTTGTTCATTGTGATCTTAAACCGGATAACATTCTTCTCTTTCCTTCCTCCGAGGATGGTGCAAGGTATCAATTAAAGATTGCGGATTTTGGATTATCCAAGACTCGACAAGAGACAATTGATGCTGATTTTTGGAAGATTAAGTTCAGAGGAACTCCCTTTTACATGTCACCAGAATCAGTTATGGGACGAATTGAAACATCATTAGATATATGGTCTCTTGGGTGTATAGTAATTGAGATGATCACTGGGTTACGTGCTTGGAAGAACCTTCAAAGTAAAGAAGACATAATGTTCAAACTTGCATTCCTAAAAGAAGCACCAATGATACCCAATGGACTGAGTGAAGATTGTAAAGATTTCTTGAGCAAGTGTTTTGTGAAGGATCCTGACCACAGGTGGACAGCTAGTATGCTGCTTAACCATCCTTTTCTTTATCCTTCCTACAATATATATACAGGTTATAGAAGATTTTCTATGTATAGTTCAACTTTTTTCTCATATGATATTTGTGATTATGCATCGCTAGAAGTTTAA 915 0.3672 MAECEKVRILGKGSYAVVYLVVISAPQKWNSKVAAMKSSTSNAFGSFVLQKEKKIMELFIGCKEIVQCYFGQFTVQKGHLTYDLFMEFSPYGSLGDLIRKKPLMENEVRIYTCMLLKGLSCIHERGVVHCDLKPDNILLFPSSEDGARYQLKIADFGLSKTRQETIDADFWKIKFRGTPFYMSPESVMGRIETSLDIWSLGCIVIEMITGLRAWKNLQSKEDIMFKLAFLKEAPMIPNGLSEDCKDFLSKCFVKDPDHRWTASMLLNHPFLYPSYNIYTGYRRFSMYSSTFFSYDICDYASLEV* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1807 304 SUPERFAMILY Protein kinase-like (PK-like) 5 286 IPR011009 -
Apr7g1807 304 ProSitePatterns Protein kinases ATP-binding region signature. 10 37 IPR017441 GO:0005524
Apr7g1807 304 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 275 - -
Apr7g1807 304 SMART serkin_6 4 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1807 304 Pfam Protein kinase domain 5 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1807 304 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Apr7g1807 304 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 275 - -
Apr7g1807 304 CDD STKc_MAPKKK 6 271 - -
Apr7g1807 304 Gene3D Transferase(Phosphotransferase) domain 1 1 292 - -
Apr7g1807 304 ProSiteProfiles Protein kinase domain profile. 4 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1807 Apr-Chr7 25461618 25462532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1807 10 271 MAP Kinase Kinase Kinase AT5G67080 42.222 1.15e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Apr7g1807 Pkinase 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1807 - - gmx:102664043 407.912